DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and chil-21

DIOPT Version :10

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_496029.2 Gene:chil-21 / 174502 WormBaseID:WBGene00011164 Length:470 Species:Caenorhabditis elegans


Alignment Length:457 Identity:93/457 - (20%)
Similarity:182/457 - (39%) Gaps:123/457 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TFVACLFAASTEAAS-----NLVCYY---DSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLR 64
            |.::...||||..|:     .::.||   .:|..||:.:.||            :|.|:.:..:.
 Worm    90 TSISSTVAASTYPATPGCNKRIIGYYFATQTSVITRDQVSKL------------THAVFAFVNMT 142

  Fly    65 GE-NLQAYSMNENLDIYKHQFSEVTSL-KRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVR 127
            .: :||.     :.|:.|::|:.:..: |::.|.:||::|:||:     |:.|.:..:|.....:
 Worm   143 SDGHLQI-----DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGN-----DNSNNFKPVLSSPDRK 197

  Fly   128 QIGFIRSAYDLVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQ 192
            :: ||.|....::||..||:||.:::|                               ....|:.
 Worm   198 KL-FINSTVSFLQTYDIDGVDLYWKWP-------------------------------GKTSKDI 230

  Fly   193 FTALVRDVKDSLRAD--GFLLSLTVLP---NVNSTWYFDIPALNGLVDFVNLATFDFLTPARNPE 252
            ::..:.|::.||:..  .:::|:.:.|   ..|.....||..:...|||:|:.|..:..|.:|..
 Worm   231 YSQFINDLRYSLQRQKRNYIMSIVLPPPDMGANYEAGIDIENIFDNVDFLNIFTMGYFGPWQNDA 295

  Fly   253 E--ADYSAPIYH-PDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGV 314
            .  ...::.::: .:|...|..: |.....|.::.:...|:|.|:.:..|...||..|.      
 Worm   296 GMITGAASQLFNGVNGVPGRKTY-NIHHSTERYVCKTGQSDKYNIAIPFYTMLWKHVKG------ 353

  Fly   315 PVVPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKG---NESPLRR--VSDPTKRFGGIA 374
            ||.|              |.:..|          :|...:|   .|:.:.|  |.:....|....
 Worm   354 PVNP--------------PNIEIY----------RNATFQGGVVGETSMSRKLVQEEGYDFSNPT 394

  Fly   375 YRP-----VDGQITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYDD----------FRGQ 424
            |.|     .....|...:::::..|:.:.|..|.:.:.||||.::.:..||          |.|.
 Worm   395 YNPEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDDDSNNLLNLVKFTGY 459

  Fly   425 CS 426
            |:
 Worm   460 CT 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 87/437 (20%)
chil-21NP_496029.2 Glyco_18 110..444 CDD:214753 82/418 (20%)

Return to query results.
Submit another query.