DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf1 and Chi3l1

DIOPT Version :10

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001296749.1 Gene:Chi3l1 / 89824 RGDID:620874 Length:391 Species:Rattus norvegicus


Alignment Length:448 Identity:123/448 - (27%)
Similarity:194/448 - (43%) Gaps:86/448 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRFQL--FYILGLLSVTSLTHAASNLICYYDSNSYLRQGLAKMHTNELDLALQFCTHLVYGYAGL 63
            ||..|  |.:|.||...|    |..|:|||.:.|..|:|......:.||.:|  |||::|.:|.:
  Rat    11 MRVALTGFAVLMLLQSCS----AYKLVCYYTNWSQYREGNGSCFPDALDHSL--CTHIIYSFANI 69

  Fly    64 KSGTLELFSLNVDLDMFYYKDITALRQKFPQLKILLSVGGDRDVDEAHPNKYVELLEANRTAQQN 128
            .:..|.....|   |:..|..:..|:.:.|:||.||||||     .:..::....:.:|..:::.
  Rat    70 SNNKLSTSEWN---DVTLYGMLNTLKTRNPRLKTLLSVGG-----WSFGSERFSRIVSNAKSRKT 126

  Fly   129 FIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHKSQFTD 193
            |:.|....|:..||||||||:..|                            .|:.::|   ||.
  Rat   127 FVQSVAPFLRTYGFDGLDLAWLYP----------------------------GPKDKQH---FTT 160

  Fly   194 LVGNIKNAFR------SANLMLSLTV-LPNVNSTWYFDVPKLHPQFDYINLAAFDFLTPLRNPEE 251
            |:..:|..|.      :..|:||..| ...|.....:||.::....|:|||..:||....|:  .
  Rat   161 LIKELKAEFTKEVQPGTEKLLLSAAVSAGKVTLDSGYDVAQIAQHLDFINLMTYDFHGTWRH--T 223

  Fly   252 ADFTAPIFFQDEQNRLP--HLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSGLSGAPIV 314
            ....:|: |:.:|:..|  ..||::.:.|.|:...|..||.:||.::|:::.|:......|||| 
  Rat   224 TGHHSPL-FRGQQDTGPDRFSNVDYGVGYMLRLGAPTNKLVMGIPTFGKSFTLASSENQVGAPI- 286

  Fly   315 HETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRPADDN 379
              |....||  :....:|.|::.|||..|......:..|:..|.       ...||.        
  Rat   287 --TGSGLPG--RYTKEKGTLAYYEICDFLRGAEVHRILGQQVPF-------ATKGNQ-------- 332

  Fly   380 GDFGVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDDFRGLCTGQK--YPILRSIK 435
                 |:.:|||:....|..|.|.|.|.|..::.:..|||||...|..  :|:..:||
  Rat   333 -----WVGYDDPESVKNKVKYLKNKQLAGAMVWAVDLDDFRGSFCGHNVHFPLTNAIK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 114/424 (27%)
Chi3l1NP_001296749.1 GH18_chitolectin_chitotriosidase 32..388 CDD:119351 114/423 (27%)

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