DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf1 and AT4G19770

DIOPT Version :10

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_193712.2 Gene:AT4G19770 / 827721 AraportID:AT4G19770 Length:261 Species:Arabidopsis thaliana


Alignment Length:317 Identity:72/317 - (22%)
Similarity:123/317 - (38%) Gaps:81/317 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 QQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHKSQ 190
            :::||.|::.:.:..|||||||.::.|||         .:....|.:|.. ::....|.|.:.|:
plant     8 RKSFILSTISIARSYGFDGLDLDWEYPRN---------AAEMSDFAELLK-EWRYAVQGEAYSSE 62

  Fly   191 FTDLVGNIKNAFRSANLMLSLTVL--PNVNSTWYFDVPKLHPQFDYINLAAFDFLTPLRNPEEAD 253
            ...|:             |:.||.  .|.|...| .|..:....|::|:.|:||.    .|...:
plant    63 LPVLI-------------LTATVYYSSNYNGVVY-PVKFISELLDWVNIKAYDFY----GPGCTE 109

  Fly   254 FTAP---IFFQDEQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSGLSGAPIVH 315
            .|.|   ::.|.:..     :.:..:..|:....|.:|..||...||.||.|:.       |..|
plant   110 VTGPPAALYLQSDGP-----SGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLAD-------PKNH 162

  Fly   316 ----ETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRPA 376
                :|.|.|      .|.:|.:|:.::.:.:..|.:                |..:.|..:   
plant   163 GYYVDTTGPA------ISDDGEISYSQLKTWIVDNKA----------------TTVHDNIVI--- 202

  Fly   377 DDNGDF----GVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDDFRGLCTGQKYP 429
               ||:    ..|:.:|..:....|.:|||.|||.|...:.:..||...|.:....|
plant   203 ---GDYCYAGTTWIGYDSEESIVTKVIYAKQKGLLGYFSWQVGGDDKSELSSAGSSP 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 72/317 (23%)
AT4G19770NP_193712.2 GH18_chitinase-like <1..250 CDD:471972 70/309 (23%)

Return to query results.
Submit another query.