DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf1 and chia.1

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio


Alignment Length:452 Identity:110/452 - (24%)
Similarity:190/452 - (42%) Gaps:95/452 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LGLLSVTSLTHAASNLICYYDSNSYLRQGLAKMHTNELDLALQFCTHLVYGYAGLK-SGTLELFS 72
            ||:|....:. :::.|:||..:.|..|.|..|.....:|..|  |||:||..|.:. ...:....
Zfish    10 LGILLSLQIV-SSTKLVCYMTNWSQYRPGNGKFLPENIDPFL--CTHVVYALATISYDNQITTIE 71

  Fly    73 LNVDLDMFYYKDITALRQKFPQLKILLSVGGDRDVDEAHPNKYVELLEA--NRTAQQNFIDSSMI 135
            .| |:|:  ||.:..|::..|.||..|||||  .|:...|  |:.::..  ||.|   ||.::::
Zfish    72 WN-DVDL--YKSMNELKKVNPALKTQLSVGG--LVNGVSP--YINMVATPENRKA---FIRNALL 126

  Fly   136 LLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHKSQFTDLVGNIKN 200
            .|:.:.|||:|:.:|.|        |..||               .||   .|.:.|..:..:::
Zfish   127 FLRLHEFDGMDIDWQYP--------GHNGS---------------PPQ---DKQRLTTFIKEMRD 165

  Fly   201 AF-------RSANLMLSL------TVLPNVNSTWYFDVPKLHPQFDYINLAAFDF---LTPLRNP 249
            |.       :...|:||:      |.:.|.     ::..::....|::.:.::|:   ..|:   
Zfish   166 AIEQEAIDTKKTPLLLSIKVSAIKTTIENA-----YEAKEVASLVDFVTIMSYDYHGHWDPI--- 222

  Fly   250 EEADFTAPIFFQD-EQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSGLSGAPI 313
              ....:|:|... :...:.|.|:...:.:||.:..|..:|.||:.:|||.:.||......||| 
Zfish   223 --TGHNSPLFRSSFDTGSIVHHNINSSLEFWLGSGAPADRLLLGLPTYGRTFMLSTSQTGLGAP- 284

  Fly   314 VHETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRPADD 378
               ..|.|..|...:.| |..|:.|||...|.........::.|             ||::..  
Zfish   285 ---ANGPADAGPYTREA-GFWSYYEICPMESSVPIHWIDEQMVP-------------YAVQGR-- 330

  Fly   379 NGDFGVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDDFRG-LCTGQKYPILRSIKYFMG 439
                 .|:.||:.:....|..:.....|||.:::.|.:|||.| .|....||::..::..:|
Zfish   331 -----AWVGFDNQESITAKVQWLNSLKLGGASVWTLDFDDFAGRFCYNGAYPLVNHLRNSLG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 106/435 (24%)
Glyco_18 24..417 CDD:214753 99/412 (24%)
chia.1NP_998215.1 Glyco_18 23..364 CDD:214753 99/413 (24%)
GH18_chitolectin_chitotriosidase 24..386 CDD:119351 106/434 (24%)
ChtBD2 407..455 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592095
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.