DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf1 and Idgf6

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001286499.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster


Alignment Length:451 Identity:224/451 - (49%)
Similarity:311/451 - (68%) Gaps:26/451 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILGLLSVTSLTHAA-------------SNLICYYDSNSYLRQGLAKMHTNELDLALQFCTHLVYG 59
            |:..|::.||..|:             .:|:|||||.|::::||.|:..:||:.|||||.:||||
  Fly     2 IIKALAIVSLCLASIQASKVGAPQLPKKHLVCYYDSASFVKEGLGKLVIDELEPALQFCDYLVYG 66

  Fly    60 YAGLKSGTLELFSLNVDLDM----FYYKDITALRQKFPQLKILLSVGGDRDVD-----EAHPNKY 115
            |||::..:.:..|||..||:    ..|:.:|.|::|:|.:|||||||||:|::     :..||||
  Fly    67 YAGIERDSHKAVSLNQQLDLDLGKGLYRTVTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKY 131

  Fly   116 VELLEANRTAQQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVV 180
            :|||| :.|.:..|:::...|:|..||||||:|:|.|:|||:|||..:||.||.|||:|:||.:|
  Fly   132 LELLE-SPTGRTRFVNTVYSLVKTYGFDGLDVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIV 195

  Fly   181 DPQAEEHKSQFTDLVGNIKNAFRSANLMLSLTVLPNVNSTWYFDVPKLHPQFDYINLAAFDFLTP 245
            |.::||||.|||.|:.::|||||..||:||.||||||||:.::|:|.:....|::||..|||.||
  Fly   196 DEKSEEHKEQFTALLRDVKNAFRPDNLLLSTTVLPNVNSSLFYDIPAVVNYLDFVNLGTFDFFTP 260

  Fly   246 LRNPEEADFTAPIFFQDEQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSGLSG 310
            .||||.||:.|||:...|:|  |..||..|:.|||:|:||..|:|:|:|:|||.|||:..||.:|
  Fly   261 QRNPEVADYAAPIYELSERN--PEFNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDSGDTG 323

  Fly   311 APIVHETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRP 375
            .|.|.:....||.|...| ..|:.||||:|:.|....:|..:|..|||.||.|..:::|:||.|.
  Fly   324 VPPVKDVKDEAPVGGNTQ-VPGIYSWPEVCALLPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRA 387

  Fly   376 ADDNGDFGVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDDFRGLCTGQKYPILRSIKY 436
            ||..||.|:|:||:|||.|..||.|.:.:.|||:|||||||||||||||.:||||||:|||
  Fly   388 ADKKGDNGIWVSFEDPDTAADKAGYVRTENLGGVALFDLSYDDFRGLCTNEKYPILRAIKY 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 219/423 (52%)
Glyco_18 24..417 CDD:214753 201/401 (50%)
Idgf6NP_001286499.1 GH18_IDGF 30..450 CDD:119352 219/423 (52%)
Glyco_18 31..429 CDD:214753 201/401 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469723
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D227150at33208
OrthoFinder 1 1.000 - - FOG0008541
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.