DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf1 and cht-4

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:432 Identity:95/432 - (21%)
Similarity:166/432 - (38%) Gaps:87/432 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILGLLSVTSLTHAASNLICYYDSNSYLRQGLAKMHTNELDLALQFCTHLVYGYAGLKSGTLELFS 72
            |..||.:....|... :.|||..|   :..::|:..|       .|||::...:...|....|..
 Worm     5 IFSLLLLILPVHTVP-VACYYILN---QPDISKVPKN-------LCTHIILINSAHVSEDGRLQG 58

  Fly    73 LNVDLDMFYYKDITALRQKFP-QLKILLSVGGDRDVDEAHPNKYVELLEANRTAQQNFIDSSMIL 136
            ...||:.|        .:.|. ::::.:|:        ...|.....|.:|.|...||..:...:
 Worm    59 FEQDLEHF--------SELFDGKIELFVSI--------TSSNPSFSFLTSNTTLMHNFSSTVTQV 107

  Fly   137 LKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHKSQFTDLVGNIKNA 201
            |::...:|:|:.::.|             .|..           |.|..: |:.|...:..:|:.
 Worm   108 LQKYRLNGVDIDWEFP-------------VWSR-----------DAQKSD-KAHFATFLRILKSH 147

  Fly   202 FRSANLMLSLTVL-PNVNSTWYFDVPKLHPQFDYINLAAFDF--LTPLRNPEEADFTAPIF-FQD 262
            .:.|:|.||:.|. |...|...:||..|....|.:.:..:||  .....|| ...|.||:. .:.
 Worm   148 LKPADLKLSVAVSGPPTISRKAYDVDALKMYADMVQIMNYDFHVFNRYSNP-FVGFNAPLHPMRA 211

  Fly   263 EQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSGLSGAPIVHETCGVAPGGIQI 327
            |.:.|..:|.|..:..|.....|......||.:|.||::|.       ...:|:     |....|
 Worm   212 EISVLGEMNAEASMKTWYDLGLPRNISFFGIPTYARAFQLL-------THYLHK-----PYSPAI 264

  Fly   328 QSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRPADDNGDFGVWLSFDDPD 392
            ::...:.:.|::|. .:|  |..|             |..:.::|..|. ..||.|:|:|:::..
 Worm   265 RARPEITNLPDVCI-FAQ--SGYY-------------TTVWNHHAQAPY-LYGDDGIWVSYENQQ 312

  Fly   393 FAGIKAVYAKGKGLGGIALFDLSYDDFRGLCTGQKYPILRSI 434
            ....|..:|:...:||:.:|.:..||..|.|....||:|..|
 Worm   313 SILAKMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLLTKI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 91/417 (22%)
Glyco_18 24..417 CDD:214753 83/397 (21%)
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 87/403 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.