DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf1 and chil-23

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001254212.1 Gene:chil-23 / 187739 WormBaseID:WBGene00011167 Length:432 Species:Caenorhabditis elegans


Alignment Length:470 Identity:102/470 - (21%)
Similarity:178/470 - (37%) Gaps:124/470 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YILGLLSVTSLTHAASNL-IC---YYDSNS-------------YLRQGLAKMHTNELDLALQFCT 54
            ||:..:::.|:......| :|   |:.:.|             |...|.:.:.:.:    |...|
 Worm    36 YIIITITLISIIIVGFGLGLCAQIYFQAESDVLPICDKRIIGYYSGSGTSNITSTQ----LSNLT 96

  Fly    55 HLVYGYAGL-KSGTLELFSLNVDLDMFY-YKDITALRQKFPQLKILLSVGGDRDVDEAHPNKYVE 117
            |.|:.:..: ..||| ||:..::.:.|. .|::  :|....::|::.|:||..:      :||..
 Worm    97 HTVFAFVYMTPDGTL-LFNNQIEKNRFLKLKEV--VRNGNSKIKLMFSIGGKDN------SKYFS 152

  Fly   118 LLEANRTAQQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDP 182
            .:..:....|.||:|.:..|:....||:||                  :||.            |
 Worm   153 SVIPSEERIQTFIESILEFLEAYDLDGVDL------------------FWKW------------P 187

  Fly   183 QAEEHKSQFTDLVGNIKNAFRSAN--LMLSLTVLPNVNSTW-YFDVPKLHPQFDYINLAAFDFLT 244
            : ||::..:...:..::..|.:..  .:||:.:.|.....| ...:.|:....|:||..:.|:.|
 Worm   188 E-EEYRDAYFAFINQLRKTFEAKKKYYILSIVIPPPTLDGWGKKRLNKIIESVDFINAYSTDYYT 251

  Fly   245 PLRNPEEADF---TAPIFF--QDEQNRLPHLNVEFQINYWLQNHC---PGQKLNLGIASYGRAWK 301
            ||.:....|.   :|||:|  |.:..|..|....   ||    .|   ...|.|:.|..|...|:
 Worm   252 PLADNLSDDIAGPSAPIYFGAQGKSERNVHHTAR---NY----SCLTKQASKFNIVIPFYATLWE 309

  Fly   302 LSKGSGLSGAPIVHETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQ 366
                       .|:||.        :.|..|:  :..:.....:.....|...||    |.....
 Worm   310 -----------NVYETV--------LDSKRGV--YRHVAPFYGRTVGKTYLSRLA----VKQEGF 349

  Fly   367 KYGNYALRPA-----DDNGDFGVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDD-------- 418
            :..:|:..||     ..|...|::|:|:..:....|..|.|.:.|||:.:|.:..||        
 Worm   350 QVESYSYDPAPRAAFSYNRTIGIYLTFETKESIRAKIDYVKDRILGGVWIFSVDMDDETNSQLKA 414

  Fly   419 --FRGLCT---GQKY 428
              |.|.||   |.||
 Worm   415 VSFDGFCTIGNGSKY 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 99/454 (22%)
Glyco_18 24..417 CDD:214753 90/427 (21%)
chil-23NP_001254212.1 Glyco_18 74..405 CDD:214753 86/406 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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