DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf1 and chil-16

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_496020.1 Gene:chil-16 / 187732 WormBaseID:WBGene00011158 Length:440 Species:Caenorhabditis elegans


Alignment Length:418 Identity:93/418 - (22%)
Similarity:161/418 - (38%) Gaps:115/418 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LICYY--DSNSYLRQG-LAKMHTNELDLALQFCTHLVYGYAGL-KSGTLELFSLNVDLDMFYYKD 84
            ::.||  :.|..:..| |||:            ||.|:.:..| ..||:...|........|.:.
 Worm    88 IVGYYYRNGNDSIMMGQLAKL------------THAVFAFLELHPDGTIHFESRKAKESFLYLRK 140

  Fly    85 ITALRQKFPQLKILLSVGGDRDVDEAHPNKYVELLEANRTAQQNFIDSSMILLKRNGFDGLDLAF 149
            :.:: .|| ..||:.|:||..:.....|      :..|...::.||||.:..||:...||:||.:
 Worm   141 LASI-LKF-DAKIMFSIGGPANTQFFSP------IIQNEEMKRKFIDSIIYFLKQYKLDGVDLFW 197

  Fly   150 QLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHKSQFTDLVGNIKNAFRS--ANLMLSLT 212
            :                |.|     :||          |..::..:..:|:..||  .|.::|:.
 Worm   198 K----------------WSS-----SGD----------KFTYSSFLQELKHKLRSHRQNYIISIV 231

  Fly   213 VLPNVNSTWY--FDVPKLHPQFDYINLAAFDFLTPLRN-------PEEADFTAPIFFQDEQNRLP 268
            :.|....||.  :|:.::....|::|:.:.|:..|..|       |     :||:.|.....:  
 Worm   232 LPPAGVDTWELGYDLEEIMEHVDFMNVYSMDYSGPWDNQWGTPTGP-----SAPLAFNIGPRK-- 289

  Fly   269 HLNVEFQINYW-LQNHCPGQKLNLGIASYGRAWKLSKGSGLSGAPIVHETCGVAP-------GGI 325
            :.||::.:.|: .:...|| |.|:.|..|.|.|.           .|.|  .|.|       ..|
 Worm   290 NFNVDWTMKYYSCKTQQPG-KFNMVIPFYARYWN-----------NVQE--AVDPRTEVFRNAEI 340

  Fly   326 QIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRPADDNGDFGVWLSFDD 390
            :...|:|:        .....:||.|:  :|....:|...     |..:| |:...|    :|::
 Worm   341 RNNRADGV--------PYMDRSSADYK--MASWDNLTSTP-----YIWKP-DERRFF----TFEN 385

  Fly   391 PDFAGIKAVYAKGKGLGGIALFDLSYDD 418
            .....||..||....|||:.::.:...|
 Worm   386 QKSIAIKTRYAIDMNLGGVWIWSVDMGD 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 93/418 (22%)
Glyco_18 24..417 CDD:214753 92/415 (22%)
chil-16NP_496020.1 Glyco_18 87..411 CDD:214753 92/414 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164477
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

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