DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf1 and chil-2

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_496133.2 Gene:chil-2 / 182431 WormBaseID:WBGene00007466 Length:383 Species:Caenorhabditis elegans


Alignment Length:451 Identity:88/451 - (19%)
Similarity:161/451 - (35%) Gaps:156/451 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LTHAASNLICYY--DSNSYLRQGLAKMHTNELD------LALQF-CTHLVYGYAG-------LKS 65
            :.:..|:.:.:|  ||.::        .|||::      |...| |...|..|:.       ||.
 Worm     2 VAYGLSSAVLFYLEDSEAF--------ETNEINYEYSSKLMANFKCQKRVVAYSAKFLSNHQLKK 58

  Fly    66 GTLELFSLNVDLDMFYYKDIT----------ALRQKF--PQLKILLSVGGDRDVDEAHPNKYVEL 118
            .|..:|:   .:.:|....|.          |.:.|.  |.|||::.:.|          |:..:
 Worm    59 LTHFIFT---SISIFPNGTIKWPNCENFESYARKAKMDNPNLKIMVEING----------KFFSV 110

  Fly   119 LEANRTAQQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQ 183
            | |....:.:||.|....:..:.|||:|:.:..|.::     .:...:.|.|::          :
 Worm   111 L-AEDEKKNSFIKSISSFVVDHKFDGVDIFWSWPEDE-----DTFHLFIKEFRE----------K 159

  Fly   184 AEEHKSQFTDLVGNIKNAFRSANLMLSLTVLPNVNSTWYFDVPKLHPQFDYINLAAFDFLTPLRN 248
            .|:|                   :::|:.            :|:|..|.:..||...        
 Worm   160 LEKH-------------------MIISIA------------IPRLAQQLEGFNLKLL-------- 185

  Fly   249 PEEADFTAPIFFQDEQNRLPHLNVEFQINYWLQNHCPGQKLNLGIAS--YGRAWKLSKGSGLSGA 311
                           .|.:..||| ..|||:  ...||...|:|..|  ||     .:...:.|.
 Worm   186 ---------------MNHIDFLNV-LSINYY--EPLPGNGANIGPISPLYG-----GQRGNVDGT 227

  Fly   312 PIVHETC----------GVAPGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRK-VTD-- 363
             :.:.||          ||...||.....:..|:..:...|::||.:..  |:....|| :.|  
 Worm   228 -LKYLTCITKRPSILNMGVTFTGIFWNGVKDGLNEQDDIWKVAQNENGP--GKSIGWRKFIKDRR 289

  Fly   364 --LTQKY----GNYALRPADDNGDFGVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDD 418
              :.|.:    .:||..|...     ::|:|::......|.:|.:.|.:||:.::::..||
 Worm   290 NTIPQWHDSSKSSYAWDPKSK-----IFLAFENEKSLSEKVIYVRNKNIGGLVIWNVDQDD 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 87/445 (20%)
Glyco_18 24..417 CDD:214753 85/441 (19%)
chil-2NP_496133.2 Glyco_18 42..344 CDD:214753 76/400 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164460
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

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