DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf1 and chil-1

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001040740.1 Gene:chil-1 / 182430 WormBaseID:WBGene00007465 Length:465 Species:Caenorhabditis elegans


Alignment Length:403 Identity:78/403 - (19%)
Similarity:164/403 - (40%) Gaps:92/403 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LQFCTHLVYGYAGLKSGTLELFSLNVDLDMFYYKDITA-LRQKFPQLKILLSVGGDRDVDEAHPN 113
            ||..||::|.:|..::|.:.:..   |..:..::::.: .|:....|||::|:||       |.|
 Worm   136 LQMLTHIIYLFAIPRNGVITIVD---DRSLRKFEEMKSNAREASSTLKIMISIGG-------HYN 190

  Fly   114 -KYVELLEANRTAQQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGD 177
             :....|..|.|::..|::|.:..:::...||:::.:..||.:.:      .:|....::|    
 Worm   191 SRSFSGLVFNETSRTVFVNSIVSFVEKYDIDGIEMFWMWPRYRDK------NNYLMFIQEL---- 245

  Fly   178 FVVDPQAEEHKSQFTDLVGNIKNAFRSANLMLSLTVLPNVNSTWYFDVPKLHPQFDYINLAAFDF 242
                      :..||:|...:.   |..:.::||....|:|  ..|::.:.....|:..:..|:.
 Worm   246 ----------RYAFTELQNKLN---RKEDFVISLVASSNLN--LLFNLVEFLNSVDFFGIYLFNS 295

  Fly   243 LTPLRNPEEADFTAPIFFQDEQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSG 307
            .:....|:     :|::....:      ||:..:.|::.......|.|:.|:.:...|   :|:.
 Worm   296 YSYQVGPD-----SPLYGGGSR------NVDEIMKYYICKTGQPSKFNIIISFHATYW---EGTD 346

  Fly   308 LSGAPIVHETCGV----APGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKY 368
            |   |:..::..:    ..|.:.:     .|.|.|:         ..::..|..: |..:||:. 
 Worm   347 L---PLRDDSDNIWKVNESGRLAV-----ALRWREL---------PHHKWNLENI-KFHNLTKT- 392

  Fly   369 GNYALRPADDNGDFGVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDD----------FRGLC 423
             :|...|    |....:|:.:|......|..|.....:|||.::.:..||          ...||
 Worm   393 -SYIWIP----GPPTRFLTLEDEQSLREKNRYVADHNIGGITMWTIDQDDDDHTLLKVVSSAELC 452

  Fly   424 TGQKYPILRSIKY 436
            ||::   ..:|||
 Worm   453 TGEE---KNTIKY 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 78/403 (19%)
Glyco_18 24..417 CDD:214753 69/372 (19%)
chil-1NP_001040740.1 Glyco_18 118..436 CDD:214753 69/372 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164454
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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