DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf1 and chil-21

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_496029.2 Gene:chil-21 / 174502 WormBaseID:WBGene00011164 Length:470 Species:Caenorhabditis elegans


Alignment Length:459 Identity:98/459 - (21%)
Similarity:170/459 - (37%) Gaps:132/459 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SVTSL--THAAS----------NLICYY---DSNSYLRQGLAKMHTNELDLALQFCTHLVYGYAG 62
            :|||:  |.|||          .:|.||   .::...|..::|:            ||.|:.:..
 Worm    88 TVTSISSTVAASTYPATPGCNKRIIGYYFATQTSVITRDQVSKL------------THAVFAFVN 140

  Fly    63 LKSGTLELFSLNVDLDMF---YYKDITALRQKFPQLKILLSVGGDRDVDEAHPNKYVELLEANRT 124
            :.|..    .|.:|.|:.   :...|...:|:.||:|:::|:||:.:.:...|      :.::..
 Worm   141 MTSDG----HLQIDGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNNFKP------VLSSPD 195

  Fly   125 AQQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYW----KSFKKLFTGDFVVDPQAE 185
            .::.||:|::..|:....||:||                  ||    |:.|.::           
 Worm   196 RKKLFINSTVSFLQTYDIDGVDL------------------YWKWPGKTSKDIY----------- 231

  Fly   186 EHKSQF-TDLVGNIKNAFRSANLMLSLTVLP---NVNSTWYFDVPKLHPQFDYINLAAFDFLTPL 246
               ||| .||..:::...|  |.::|:.:.|   ..|.....|:..:....|::|:....:..|.
 Worm   232 ---SQFINDLRYSLQRQKR--NYIMSIVLPPPDMGANYEAGIDIENIFDNVDFLNIFTMGYFGPW 291

  Fly   247 RNPEEADFTAPIFFQDEQNRLP---HLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSGL 308
            :|.......|.....:..|.:|   ..|:......::.......|.|:.|..|...||..||.  
 Worm   292 QNDAGMITGAASQLFNGVNGVPGRKTYNIHHSTERYVCKTGQSDKYNIAIPFYTMLWKHVKGP-- 354

  Fly   309 SGAPIVHETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQ--YRGELAPLRKVT-----DLTQ 366
                       |.|..|:|.                :||:.|  ..||.:..||:.     |.:.
 Worm   355 -----------VNPPNIEIY----------------RNATFQGGVVGETSMSRKLVQEEGYDFSN 392

  Fly   367 KYGNYALRPA-DDNGDFGVWLSFDDPDFAGIKAVYAKGKGLGGIALFDLSYDD----------FR 420
            ...|..:|.| ..|.....:|:|:..|....|..|.|.:.|||:.::.:..||          |.
 Worm   393 PTYNPEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDDDSNNLLNLVKFT 457

  Fly   421 GLCT 424
            |.||
 Worm   458 GYCT 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 91/437 (21%)
Glyco_18 24..417 CDD:214753 85/417 (20%)
chil-21NP_496029.2 Glyco_18 110..444 CDD:214753 85/418 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164466
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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