DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf1 and chil-24

DIOPT Version :9

Sequence 1:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_494455.1 Gene:chil-24 / 173661 WormBaseID:WBGene00020407 Length:410 Species:Caenorhabditis elegans


Alignment Length:391 Identity:82/391 - (20%)
Similarity:150/391 - (38%) Gaps:84/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 THLVYGYAGLK-SGTLELFSLNVDLDMFYYKDI--TALRQKFPQLKILLSVGGDRDVDEAHPNKY 115
            ||.|:.|..:| .|:|   ....|.....:.::  ...|.:...:|:::|:||..:....:|   
 Worm    77 THAVFAYVQMKFDGSL---GFKNDAARIRFSNLRDKVRRNEDSNVKMMISIGGFENSQHFYP--- 135

  Fly   116 VELLEANRTAQQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVV 180
               :.:|...::.|::|....|..:...|:|:.::.| :...|.|.|  .:....::....:|::
 Worm   136 ---VLSNVEMKKAFLNSISSFLAYHELHGVDIFWKWP-SPEDKAHYS--RFLADLRQHLGYEFII 194

  Fly   181 D---PQAEEHKSQFTDLVGNIKNAFRSANLMLSLTVLPNVNSTWYFDVPKLHPQFDYINLAAFDF 242
            .   ||||                  .:||.|.            :|:..:....|:.|:.:.|:
 Worm   195 SVAVPQAE------------------VSNLELG------------YDLRTISSHVDFFNVHSMDY 229

  Fly   243 LTPLRNPEEADFTAPIFFQDEQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSG 307
            ..|..| |....|.||.......|  | ||::.:.|:.:......|||:.|..:.|.||      
 Worm   230 YGPWPN-EWGKPTGPISPLYGPTR--H-NVDWTLRYYAEKTGEPGKLNMVIPFFVRLWK------ 284

  Fly   308 LSGAPIVHETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQK-YGNY 371
                 .|.|.  |.||....:..|.:.:.|:..:.:|:.::.....:|:|    .|..:: ..:|
 Worm   285 -----NVPEP--VEPGRQVFRDVELVDNKPQGEAYMSRWSAQHEELDLSP----ADWDEETRSSY 338

  Fly   372 ALRPADDNGDFGVWLSFDDPDFAGIKAVYAKGKGLGGI---------ALFDLSYDDFRGLCTGQK 427
            ...|...|     :::|:.......|..|.|.|.|||:         .|.|....|..|:...|:
 Worm   339 TWNPDTRN-----FVTFETDKSIQEKMKYVKEKNLGGVWIWHVDANEKLLDSVRFDGEGVVDDQE 398

  Fly   428 Y 428
            |
 Worm   399 Y 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 82/391 (21%)
Glyco_18 24..417 CDD:214753 78/378 (21%)
chil-24NP_494455.1 Glyco_18 55..378 CDD:214753 76/368 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164464
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

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