DRSC/TRiP Functional Genomics Resources

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Protein Alignment jhamt and pmt-2

DIOPT Version :10

Sequence 1:NP_609793.2 Gene:jhamt / 34977 FlyBaseID:FBgn0028841 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_504248.1 Gene:pmt-2 / 178854 WormBaseID:WBGene00018811 Length:437 Species:Caenorhabditis elegans


Alignment Length:285 Identity:59/285 - (20%)
Similarity:105/285 - (36%) Gaps:91/285 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QHANQVQRH-----------------DAKLILDEFASTMQWRSDGEDA----------------- 38
            :|:|.|:::                 ||.:...:|....|:.:.|.||                 
 Worm   147 EHSNYVEQNFLDFIFVFRKKVFAPTTDATITFRDFLDKTQYTNTGIDAYEWMFGVNFISPGGYDE 211

  Fly    39 ----------------LLDVGSGSG----NVLMDFVKPLLPIRGQLV-GTDISSQMVHYASK--H 80
                            :||:|.|.|    .|..:|        |..| |.|:||.|:..|.:  |
 Worm   212 NLKIIKRFGDFKPGQTMLDIGVGIGGGARQVADEF--------GVHVHGIDLSSNMLAIALERLH 268

  Fly    81 YQREERTRFQVLDIGCERLPEELSGRFDHVTSFYCLHWVQNLKGALGNIYNLLKPEGGDCLLAFL 145
            .:::.|.::.:.|....:..:   ..||:|.|..|:..:.:.:.....||..||| ||..|:...
 Worm   269 EEKDSRVKYSITDALVYQFED---NSFDYVFSRDCIQHIPDTEKLFSRIYKALKP-GGKVLITMY 329

  Fly   146 ASNPVYEVYKILKTNDKWSTFMQDVENFISPLHYSLSPGEEFSQLLNDVGFVQHNVEIRN----- 205
            ...     |.  :.:||:.|::.....|:..|       :|.:.:.|..|||  ||:..|     
 Worm   330 GKG-----YG--EQSDKFKTYVAQRAYFLKNL-------KEIADIANKTGFV--NVQTENMTPRF 378

  Fly   206 -EVFVYEGVRTLKDNVKAICPFLER 229
             |:.:.|.....::..:.:..|.:|
 Worm   379 KEILLEERGHLEQNEAEFMSKFTQR 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jhamtNP_609793.2 Methyltransf_12 40..137 CDD:400515 28/103 (27%)
pmt-2NP_504248.1 PMT2_N 45..169 CDD:436190 3/21 (14%)
PLN02336 <68..433 CDD:177970 59/285 (21%)

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