DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and TRX3

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_010006.1 Gene:TRX3 / 850444 SGDID:S000000679 Length:127 Species:Saccharomyces cerevisiae


Alignment Length:105 Identity:32/105 - (30%)
Similarity:46/105 - (43%) Gaps:18/105 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAKALKGVVKVGSVNAD 84
            |.|....:.:||.....|.::|.:...|::|||.|||.|:.:.|...||.:|..   .|..|..|
Yeast    20 FQSSYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP---DVRFVKCD 81

  Fly    85 ADST--LSGQFGVRGFPTI----------KIFGANKKSPT 112
            .|.:  ::.:..|...||.          ||.|||   ||
Yeast    82 VDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGAN---PT 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299 30/99 (30%)
PDI_a_P5 157..262 CDD:239299
Thioredoxin_6 190..383 CDD:290560
P5_C 271..400 CDD:239281
TRX3NP_010006.1 TRX_family 35..125 CDD:239245 28/90 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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