DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaBP1 and PDI1

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_009887.1 Gene:PDI1 / 850314 SGDID:S000000548 Length:522 Species:Saccharomyces cerevisiae


Alignment Length:499 Identity:98/499 - (19%)
Similarity:153/499 - (30%) Gaps:223/499 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SILLLAFVVGSVSAFYSPSD-GVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLA 69
            |.||||..|.:.....:|.| .||:|...:|:..:...|.: :.||:|||||||:::.|||.|.|
Yeast    12 SSLLLASSVFAQQEAVAPEDSAVVKLATDSFNEYIQSHDLV-LAEFFAPWCGHCKNMAPEYVKAA 75

  Fly    70 KAL-KGVVKVGSVNADADSTLSGQFGVRGFPTIKIF-GANKKSPTDYNGQRTAKAIAE------- 125
            :.| :..:.:..::...:..|..:..:.|||::||| .::..:..||.|.|||:||.:       
Yeast    76 ETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQ 140

  Fly   126 ----------AALA--------------------------------------------------- 129
                      |.||                                                   
Yeast   141 PAVAVVADLPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFNDYDFVSAENADDDFKLSIY 205

  Fly   130 ----------------------------------------------------------------- 129
                                                                             
Yeast   206 LPSAMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYNDEEEL 270

  Fly   130 --------EVKKKVQGVLGGGG------GSSSGGSGSSSG------DDVIE--------LTEDNF 166
                    |:.||.:|::....      |..:|.......      .|:.|        |:|:.|
Yeast   271 EEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNMKEQFPLFAIHDMTEDLKYGLPQLSEEAF 335

  Fly   167 DKL-------------------------VLNSDDIW--------------------------LVE 180
            |:|                         ::.|.:|:                          ||.
Yeast   336 DELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVL 400

  Fly   181 FFAPWCGHCKNLAP---EWAKAAKELKGKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRA 242
            ::||||||||.|||   |.|.........|.:..||.|.:..:...  :.|||||..:|.|.|  
Yeast   401 YYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVV--IEGYPTIVLYPGGKK-- 461

  Fly   243 SDAQEYDGGRTASDIVSWASDKHVANVPAPELIEIINESTFETA 286
            |::..|.|.|:...:..:..:....:|....|.|...|...|.|
Yeast   462 SESVVYQGSRSLDSLFDFIKENGHFDVDGKALYEEAQEKAAEEA 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 30/94 (32%)
PDI_a_P5 157..262 CDD:239299 40/166 (24%)
P5_C 271..400 CDD:239281 5/16 (31%)
PDI1NP_009887.1 ER_PDI_fam 32..492 CDD:273457 85/464 (18%)

Return to query results.
Submit another query.