DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaBP1 and Pdia5

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_082571.1 Gene:Pdia5 / 72599 MGIID:1919849 Length:517 Species:Mus musculus


Alignment Length:412 Identity:99/412 - (24%)
Similarity:176/412 - (42%) Gaps:64/412 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AFVVGSVSAFYSPSDG------------VVEL-TPSNFDREVLKDDAIWVVEFYAPWCGHCQSLV 62
            |..:.|:.||.....|            ||.: :..:|.|.:.:::...::.||||||..|:.::
Mouse   123 AVTLKSIVAFLKDPKGPPLWEEDPGAKDVVHIDSEKDFRRLLKREEKPLLMMFYAPWCSMCKRIM 187

  Fly    63 PEYKKLAKALKGVVKVGSVNA--DADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAE 125
            |.::|.|..::|.:.:..:|.  .....:..::.|||:|||..|...:......|...||:.|.|
Mouse   188 PHFQKAATQVRGHIVLAGMNVYPSEFENIKEEYNVRGYPTICYFEKGRFLFPYENYGSTAEDIVE 252

  Fly   126 AALAEVKKKVQGVLGGGGGSSSGGSGSSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCK 190
            .....:..:.|  :.....:..|||       |..||:::||:.|.....: ||.|.||||||||
Mouse   253 WLKNPLPPQPQ--VPETPWADEGGS-------VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCK 307

  Fly   191 NLAPEWAKAAKELKGKVK----LGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGG 251
            .:.||:..||:.|.|..:    |.|:|||.:::.|..:::..:||:|:|..|.::|..|.     
Mouse   308 KMKPEFESAAEVLHGDAESSGVLAAVDATVNEALAGRFHISAFPTLKYFKNGEQQAVPAL----- 367

  Fly   252 RTASDIVSWASDKHVANVPAP-------ELIEIINESTFETACEGKPLCVVSVLPHILDCDAKCR 309
            ||....:.|..:......|.|       .::.::.::..:|..:.|...|:...|....|     
Mouse   368 RTKKKFIEWMQNPEAPPPPEPTWEEQQTSVLHLVGDNFRDTLKKKKHTLVMFYAPWCPHC----- 427

  Fly   310 NKFLDTLRTLGEKFKQKQWGWAWA-----EGGQQLALEESLEVGGFGYPAMAVVNFKKMKFSVLK 369
            .|.:.......:.||:.:.....|     :..|.|..:|:::    .||.....::.|     |.
Mouse   428 KKVIPHFTATADAFKEDRKIACAAVDCVKDKNQDLCQQEAVK----AYPTFHYYHYGK-----LV 483

  Fly   370 GSFSKD----GINEFLRDISYG 387
            ..:..|    |...|:|.:..|
Mouse   484 EKYESDRTELGFTSFIRTLREG 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299 25/107 (23%)
PDI_a_P5 157..262 CDD:239299 39/108 (36%)
Thioredoxin_6 190..383 CDD:290560 44/212 (21%)
P5_C 271..400 CDD:239281 22/133 (17%)
Pdia5NP_082571.1 PDI_b_PDIR_N 26..137 CDD:239365 4/13 (31%)
PTZ00102 122..517 CDD:240266 99/412 (24%)
PDI_a_PDIR 150..254 CDD:239295 28/103 (27%)
PDI_a_PDIR 275..377 CDD:239295 39/114 (34%)
PDI_a_PDIR 396..499 CDD:239295 18/116 (16%)
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 514..517
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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