DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Pdia6

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_082235.2 Gene:Pdia6 / 71853 MGIID:1919103 Length:440 Species:Mus musculus


Alignment Length:429 Identity:259/429 - (60%)
Similarity:316/429 - (73%) Gaps:15/429 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAKALKGVVKVGS 80
            :||..||.||.|:|||||||:|||::.|.:|:||||||||||||.|.||:||.|.|||.|||||:
Mouse    16 AVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGA 80

  Fly    81 VNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAEAALAEVKKKVQGVLGG-GGG 144
            ||||...:|.||:||:||||||||||||..|.||.|.||.:||.:|||:.:::.|:..||| .||
Mouse    81 VNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRQLVKDRLGGRSGG 145

  Fly   145 SSSGGSG---SSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKEL--- 203
            .|||..|   |||..||:|||:|.|||.||:|:|:|:|||:||||||||||.||||.||.|:   
Mouse   146 YSSGKQGRGDSSSKKDVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQ 210

  Fly   204 -KGKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDKHVA 267
             ||||||.|:|||.:|..|:.|.::|:||||.|..|....    :||||||.|||||.|.|....
Mouse   211 TKGKVKLAAVDATMNQVLASRYGIKGFPTIKIFQKGESPV----DYDGGRTRSDIVSRALDLFSD 271

  Fly   268 NVPAPELIEIINESTFETACEGKPLCVVSVLPHILDCDAKCRNKFLDTLRTLGEKFKQKQWGWAW 332
            |.|.|||:|||||...:..||...||||:|||||||..|..||.:|:.|..|.:|:|:|.|||.|
Mouse   272 NAPPPELLEIINEDIAKKTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLW 336

  Fly   333 AEGGQQLALEESLEVGGFGYPAMAVVNFKKMKFSVLKGSFSKDGINEFLRDISYGRGHTAPVRGA 397
            .|.|.|..||.:|.:|||||||||.:|.:||||::||||||:.|||||||::|:|||.||||.|.
Mouse   337 TEAGAQYELENALGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGG 401

  Fly   398 KKPAIVSVDPWDGKDGQLPTEEDIDLSDI---DLDKDEL 433
            ..|.|...:|||||||:||.|:||||||:   ||:||||
Mouse   402 SFPTITPREPWDGKDGELPVEDDIDLSDVELDDLEKDEL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299 64/92 (70%)
PDI_a_P5 157..262 CDD:239299 65/108 (60%)
Thioredoxin_6 190..383 CDD:290560 111/196 (57%)
P5_C 271..400 CDD:239281 76/128 (59%)
Pdia6NP_082235.2 PDI_a_P5 26..128 CDD:239299 69/101 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..161 12/21 (57%)
PDI_a_P5 161..266 CDD:239299 65/108 (60%)
P5_C 275..404 CDD:239281 76/128 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..440 23/40 (58%)
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 437..440 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849293
Domainoid 1 1.000 218 1.000 Domainoid score I2662
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4198
Inparanoid 1 1.050 525 1.000 Inparanoid score I1236
Isobase 1 0.950 - 0 Normalized mean entropy S1409
OMA 1 1.010 - - QHG58248
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000934
OrthoInspector 1 1.000 - - oto94182
orthoMCL 1 0.900 - - OOG6_100473
Panther 1 1.100 - - LDO PTHR45815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2193
SonicParanoid 1 1.000 - - X1799
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.880

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