DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Pdia6l1

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001102929.1 Gene:Pdia6l1 / 685171 RGDID:1597712 Length:139 Species:Rattus norvegicus


Alignment Length:141 Identity:58/141 - (41%)
Similarity:77/141 - (54%) Gaps:9/141 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LVPEYKKLAKALKGVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAE 125
            |.||:||.|..|:. |||.:|:|....:|..|:||:||||||||||:|..|..|.|.||.:|..:
  Rat     2 LTPEWKKAATVLRD-VKVRAVDAGRHQSLGDQYGVQGFPTIKIFGASKTKPEYYQGGRTREATVD 65

  Fly   126 AALAEVKKKVQGVLGGGGGSSSGG----SGSSSGDDVIELTEDNFDKLVLNSDD-IWLVEFFAPW 185
            .||:.:.:.::..||........|    ..||...|::|||:|.||..||.... :||...|.  
  Rat    66 VALSALHQLLKDCLGRHSSVYCSGKQVKGDSSCKKDMVELTDDTFDYNVLVVKTLVWLDFMFH-- 128

  Fly   186 CGHCKNLAPEW 196
             |...||.|||
  Rat   129 -GVDINLEPEW 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 30/57 (53%)
PDI_a_P5 157..262 CDD:239299 18/41 (44%)
P5_C 271..400 CDD:239281
Pdia6l1NP_001102929.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold <2..68 CDD:469754 33/66 (50%)
Blue background indicates that the domain is not in the aligned region.

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