DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CaBP1 and LOC685171

DIOPT Version :9

Sequence 1:	NP_001285979.1	Gene:	CaBP1 / 34976	FlyBaseID:	FBgn0025678	Length:	433	Species:	Drosophila melanogaster
Sequence 2:	NP_001102929.1	Gene:	LOC685171 / 685171	RGDID:	1597712	Length:	139	Species:	Rattus norvegicus

Alignment Length:	141	Identity:	58/141 - (41%)
Similarity:	77/141 - (54%)	Gaps:	9/141 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    61 LVPEYKKLAKALKGVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAE 125
            |.||:||.|..|:. |||.:|:|....:|..|:||:||||||||||:|..|..|.|.||.:|..:
  Rat     2 LTPEWKKAATVLRD-VKVRAVDAGRHQSLGDQYGVQGFPTIKIFGASKTKPEYYQGGRTREATVD 65

  Fly   126 AALAEVKKKVQGVLGGGGGSSSGG----SGSSSGDDVIELTEDNFDKLVLNSDD-IWLVEFFAPW 185
            .||:.:.:.::..||........|    ..||...|::|||:|.||..||.... :||...|.
  Rat    66 VALSALHQLLKDCLGRHSSVYCSGKQVKGDSSCKKDMVELTDDTFDYNVLVVKTLVWLDFMFH-- 128

  Fly   186 CGHCKNLAPEW 196
             |...||.|||
  Rat   129 -GVDINLEPEW 138

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CaBP1	NP_001285979.1	PDI_a_P5	26..119	CDD:239299	30/57 (53%)
		PDI_a_P5	157..262	CDD:239299	18/41 (44%)
		Thioredoxin_6	190..383	CDD:290560	5/7 (71%)
		P5_C	271..400	CDD:239281
LOC685171	NP_001102929.1	Thioredoxin_like	<2..68	CDD:294274	33/66 (50%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D290413at33208
OrthoFinder	1	1.000	-	-		FOG0000934
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100473
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.820