DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Tmx3

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_938037.2 Gene:Tmx3 / 67988 MGIID:2442418 Length:456 Species:Mus musculus


Alignment Length:287 Identity:81/287 - (28%)
Similarity:123/287 - (42%) Gaps:82/287 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 DDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKELK---GKVKLGALDATAH 217
            :|:.|..:||      ..||||||:|:||||||||.|.|.|.:...|:|   ..||:|.:|||::
Mouse    32 EDLNESFKDN------RKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSY 90

  Fly   218 QSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWA---SDKHVANVPAPELIEIIN 279
            .|.|:|:.||||||||..     :...|..|.|.||..||:.:|   |...:..:|:.::.:.:.
Mouse    91 SSIASEFGVRGYPTIKLL-----KGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFDHVR 150

  Fly   280 E--STFETACEGK-PLCVVSVLPHILDCDAKCRNKFLDTLR--------------------TLGE 321
            :  ..|.....|: ||                :.|::|...                    ||.|
Mouse   151 KRHRVFFVYIGGESPL----------------KEKYIDAASELIVYTYFFSASEDVVPEYVTLKE 199

  Fly   322 K-----FKQKQW------------GWAWAEGGQQ-LALEESL--EVGGFG-YPAMAVVNFK--KM 363
            .     ||...:            .|...|..|. |.::..|  |:|..| ..|:||::.|  .:
Mouse   200 MPAVLVFKDDTYFVYDEYEDGDLSSWISRERFQNYLTMDGFLLYELGDTGKLVAIAVIDEKNTSL 264

  Fly   364 KFSVLKG---SFSKDGINEFLRDISYG 387
            :.:.||.   ..::|..:.|.||..:|
Mouse   265 EHTRLKSIIQEVARDFRDHFHRDFQFG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 49/110 (45%)
P5_C 271..400 CDD:239281 30/166 (18%)
Tmx3NP_938037.2 PDI_a_TMX3 30..133 CDD:239298 49/111 (44%)
ER_PDI_fam 32..>347 CDD:273457 81/287 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..456
Di-lysine motif. /evidence=ECO:0000255 453..456
Blue background indicates that the domain is not in the aligned region.

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