DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and pdia5

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001107048.1 Gene:pdia5 / 556162 ZFINID:ZDB-GENE-030521-5 Length:528 Species:Danio rerio


Alignment Length:417 Identity:108/417 - (25%)
Similarity:171/417 - (41%) Gaps:96/417 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VVELTPSNFDREVLK-DDAIWVVEFYAPWCGHCQSLVPEYKKLAKALKGVVKVGSVN---ADADS 87
            ||.:......|::|| ::...::.|||||||.|:.:.|.:::.|...||...:..:|   |:.|.
Zfish   161 VVHIESEKDFRKLLKREERPILMMFYAPWCGVCKRMQPIFQQAATETKGKYVLAGMNVHPAEFDG 225

  Fly    88 TLSGQFGVRGFPTIKIF------------GANKKSPTDY--NGQRTAKAIAEAALAEVKKKVQGV 138
             :..:|.|:|:||...|            ||..|..||:  |.|.......|...:|        
Zfish   226 -VKQEFSVKGYPTFCYFEKGKFLHHYENYGATSKDITDWLKNPQPPQPKTPEVPWSE-------- 281

  Fly   139 LGGGGGSSSGGSGSSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKEL 203
                           ||..|..||:|:||.. |......|:.|:||||||||.:.||:..||:.|
Zfish   282 ---------------SGSAVFHLTDDSFDSF-LEEHPSALIMFYAPWCGHCKKMKPEYDDAAETL 330

  Fly   204 KGKVK----LGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDK 264
            .....    |.|:|.|.|:|....:.:.|:||:|:|..|.::.:    ....|:...|:.|..:.
Zfish   331 NKDPNSPGVLAAVDTTIHKSTGERFKISGFPTVKYFEKGEEKYT----LPHLRSKDKIIEWLKNP 391

  Fly   265 HVANVP------APELIEIINESTFETACEGK---------PLCVVSVLPHILDCDAKCRNKFLD 314
            .....|      .|..:..:....|..:.:.|         |.|     ||       |:|. :.
Zfish   392 QAPPPPEKSWDEMPSSVSHLGAEDFRESLKKKKHALVMFYAPWC-----PH-------CKNA-VP 443

  Fly   315 TLRTLGEKFKQ-KQWGWAWAE--GGQ--QLALEESLEVGGFGYPAMAVVNFKKM--KFSVLKGSF 372
            ...|..|.||: ::..:|..:  .||  :|..:|.:|    |||.....|:.|.  |::   |..
Zfish   444 HFTTAAEMFKEDRKIAYAAVDCTKGQNHELCKQEGVE----GYPTFNYYNYGKFSEKYN---GER 501

  Fly   373 SKDGINEFLRDISYGRGHTAPVRGAKK 399
            .:.|...|:|::   ||......|.:|
Zfish   502 GEAGFTGFMRNL---RGRDQEKVGKRK 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 33/109 (30%)
PDI_a_P5 157..262 CDD:239299 37/108 (34%)
P5_C 271..400 CDD:239281 33/145 (23%)
pdia5NP_001107048.1 PDI_b_PDIR_N 36..147 CDD:239365
PDI_a_PDIR 160..264 CDD:239295 31/103 (30%)
PDI_a_PDIR 285..388 CDD:239295 36/107 (34%)
PDI_a_PDIR 407..510 CDD:239295 26/122 (21%)
Blue background indicates that the domain is not in the aligned region.

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