DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and tmx3a

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001018393.2 Gene:tmx3a / 553578 ZFINID:ZDB-GENE-050522-396 Length:437 Species:Danio rerio


Alignment Length:147 Identity:47/147 - (31%)
Similarity:71/147 - (48%) Gaps:30/147 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 IELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKELK---GKVKLGALDATAHQSK 220
            :|..:|.|.:  ...:::|||||:||||.:|....|.|.:...|||   ..|.:|.:|.|||.|.
Zfish    23 VEGLDDKFTE--FRQNELWLVEFYAPWCAYCHTFEPVWTEVGAELKSLGSPVNVGKIDTTAHTSI 85

  Fly   221 AAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDKHVANVPAPELIEIINESTFET 285
            |.|:|:|||||||.|     :...:.:|.|.||...|:.:.:     .|..|.:           
Zfish    86 ATEFNIRGYPTIKLF-----KGDLSFDYKGPRTKDGIIEFTN-----RVSGPVV----------- 129

  Fly   286 ACEGKPLCVVSVLPHIL 302
                :||..|.:..|::
Zfish   130 ----RPLSSVQLFQHVM 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 41/105 (39%)
P5_C 271..400 CDD:239281 5/32 (16%)
tmx3aNP_001018393.2 PDI_a_TMX3 22..125 CDD:239298 41/113 (36%)
ER_PDI_fam 27..>337 CDD:273457 46/143 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..437
Di-lysine motif. /evidence=ECO:0000255 434..437
Blue background indicates that the domain is not in the aligned region.

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