DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and tmx1

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001016906.1 Gene:tmx1 / 549660 XenbaseID:XB-GENE-1015794 Length:263 Species:Xenopus tropicalis


Alignment Length:111 Identity:35/111 - (31%)
Similarity:60/111 - (54%) Gaps:13/111 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 DVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAA---KELKGKVKLGALDATAHQ 218
            |||::|:.|::: ||..:  |:::|:||||..|..|.|||.:.|   ::|  .|.:..:|.||..
 Frog    24 DVIDITDSNWNE-VLEGE--WMIKFYAPWCPACHKLQPEWNELADWGEDL--NVNIAKVDVTAQP 83

  Fly   219 SKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDK 264
            ..:..:.:...|||.....|..|     :|.|.||..|.:::.|::
 Frog    84 GLSGRFIITALPTIYHCKDGVFR-----KYQGSRTHKDFINFISER 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 34/107 (32%)
P5_C 271..400 CDD:239281
tmx1NP_001016906.1 PDI_a_TMX 23..123 CDD:239292 34/108 (31%)
GumC <170..>221 CDD:442439
Blue background indicates that the domain is not in the aligned region.

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