DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and TMX3

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_061895.3 Gene:TMX3 / 54495 HGNCID:24718 Length:454 Species:Homo sapiens


Alignment Length:287 Identity:82/287 - (28%)
Similarity:126/287 - (43%) Gaps:82/287 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 DDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKELK---GKVKLGALDATAH 217
            :|:.|..::|      .:||||||:|:||||||||.|.|.|.:...|:|   ..||:|.:|||::
Human    29 EDLDESFKEN------RNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSY 87

  Fly   218 QSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWA---SDKHVANVPAPELIEIIN 279
            .|.|:|:.||||||||..     :...|..|.|.||..||:.:|   |...:..:|:.::.|.:.
Human    88 SSIASEFGVRGYPTIKLL-----KGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQ 147

  Fly   280 E--STFETACEGK-PLCVVSVLPHILDCDAKCRNKFLDTLR--------------------TLGE 321
            :  ..|.....|: ||                :.|::|...                    ||.|
Human   148 KRHRVFFVYVGGESPL----------------KEKYIDAASELIVYTYFFSASEEVVPEYVTLKE 196

  Fly   322 K-----FKQKQW------------GWAWAEGGQQ-LALEESL--EVGGFG-YPAMAVVNFK--KM 363
            .     ||.:.:            .|...|..|. ||::..|  |:|..| ..|:||::.|  .:
Human   197 MPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSV 261

  Fly   364 KFSVLKG---SFSKDGINEFLRDISYG 387
            :.:.||.   ..::|..:.|.||..:|
Human   262 EHTRLKSIIQEVARDYRDLFHRDFQFG 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 48/110 (44%)
Thioredoxin_6 190..383 CDD:290560 62/247 (25%)
P5_C 271..400 CDD:239281 32/166 (19%)
TMX3NP_061895.3 PDI_a_TMX3 27..130 CDD:239298 48/111 (43%)
ER_PDI_fam 29..>346 CDD:273457 82/287 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..454
Di-lysine motif 451..454
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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