DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaBP1 and CG14695

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_650032.1 Gene:CG14695 / 41314 FlyBaseID:FBgn0037850 Length:289 Species:Drosophila melanogaster


Alignment Length:170 Identity:34/170 - (20%)
Similarity:59/170 - (34%) Gaps:47/170 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 WCGHCQSLVPEYK-KLAKALKGVVKVGSVNADADSTLSGQFGVRGFPTIKIFG------------ 105
            |......|..||. ::...|:.:..:|..|.:.:....|.:. :|.|. :|:|            
  Fly    59 WISLLDELAQEYAGRILFGLRDISNIGEFNPNLNPDDFGSYR-KGLPP-RIYGKDCEGRVYDMHK 121

  Fly   106 -ANKKSPTDYNGQRTAKAIAEAALAEVKKKVQGVLGGGGGSSSGGSGSSSGDDVIELTEDNFDKL 169
             .|.|...::..|..|..:..|.          |||      :..|..|...:..||.|:     
  Fly   122 LVNAKYLREFCDQ
LLADQLFRAV----------VLG------ATASLDSKPMNYFELREE----- 165

  Fly   170 VLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKELKGKVKL 209
              :|.|: ||..:.|.|.:       |....:.|:..::|
  Fly   166 --SSSDM-LVMLYDPACYY-------WPIQKRMLRKLIRL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299 15/78 (19%)
PDI_a_P5 157..262 CDD:239299 12/53 (23%)
Thioredoxin_6 190..383 CDD:290560 3/20 (15%)
P5_C 271..400 CDD:239281
CG14695NP_650032.1 Thioredoxin_6 <20..134 CDD:290560 14/76 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.