DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Pdi

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_524079.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster


Alignment Length:266 Identity:83/266 - (31%)
Similarity:129/266 - (48%) Gaps:54/266 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 AKAIAEAALAEVKKKVQGVLGGGGGSSSGGSGSSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAP 184
            |..:|.:|.||||.:                     :.|:..|.|||.:|:.:::.: ||||:||
  Fly    12 ASYVAASAEAEVKVE---------------------EGVLVATVDNFKQLIADNEFV-LVEFYAP 54

  Fly   185 WCGHCKNLAPEWAKAAKELKGK---VKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQ 246
            ||||||.||||:||||::|..|   :||..:|||.....|.:|.||||||:|||.:||     ..
  Fly    55 WCGHCKALAPEYAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSGS-----PV 114

  Fly   247 EYDGGRTASDIVSWASDKHVANVPAPELIEIINESTFETACEGKPLCVVSVLPHILDCDAKCRNK 311
            ||.|||.|:||::|.:.|  ...||.:|..:.:...|   .:...:.::.....:...:||...|
  Fly   115 EYSGGRQAADIIAWVTKK--TGPPAKDLTSVADAEQF---LKDNEIAIIGFFKDLESEEAKTFTK 174

  Fly   312 FLDTLRTLGEKFKQKQWGWAWAEGGQQLALEESLEVGGFGYPAMAVVNFKKM--KFSVLKGSFSK 374
            ..:.|         ..:.:..:.....:|..|:.:.|        ||.||..  |.||.:|..::
  Fly   175 VANAL---------DSFVFGVSSNADVIAKYEAKDNG--------VVLFKPFDDKKSVFEGELNE 222

  Fly   375 DGINEF 380
            :.:.:|
  Fly   223 ENLKKF 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 55/107 (51%)
P5_C 271..400 CDD:239281 19/112 (17%)
PdiNP_524079.1 ER_PDI_fam 27..474 CDD:273457 76/230 (33%)
Blue background indicates that the domain is not in the aligned region.

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