DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and pdia3

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_989329.1 Gene:pdia3 / 394954 XenbaseID:XB-GENE-976328 Length:501 Species:Xenopus tropicalis


Alignment Length:489 Identity:112/489 - (22%)
Similarity:165/489 - (33%) Gaps:232/489 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LASILLLAFVVGSVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKL 68
            |.:..|||...|:.:|    ...|::||..||:..| ...:|.:|||:|||||||:.|.|||:..
 Frog     6 LGAFFLLAVTAGTQAA----GSDVLDLTDDNFESTV-SQHSILLVEFFAPWCGHCKKLAPEYEIA 65

  Fly    69 AKALKGVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAEA------- 126
            |..|||.:.:..|:..|:|....::||.|:||:|||...:.|.: |:|.|||..|...       
 Frog    66 ATKLKGTLSLAKVDCTANSNTCNKYGVSGYPTLKIFRDGEDSGS-YDGPRTADGIVSTMKKQAGP 129

  Fly   127 ------ALAEVKK----KVQGVLG------GGGGS---------------------------SSG 148
                  ::.|.:|    |...|:|      .|..|                           .|.
 Frog   130 ASVDLRSVGEFEKFISDKDASVVGFFRDLYSGPHSEFLKAANTLRDNYRFAHTDEKELVDKYDSN 194

  Fly   149 GSG--------------------------SSS--------------------------GDDVI-- 159
            |.|                          :||                          |.|::  
 Frog   195 GEGFVLFRPQHLANKFEDSSVTFPADEKITSSKIKKFIQDNIFGLCPHLTEDNKDLIQGKDLLVA 259

  Fly   160 ----------------------------------------------ELTE--------------- 163
                                                          |:||               
 Frog   260 YYDVDYEKNVKGTNYWRNRVMKVAKSFVDAGKKLNFAVANRKAFGHEVTEFGLDAGTGELPVVGI 324

  Fly   164 -------------------------------------------------------DNFDKLVLNS 173
                                                                   :|||::|.:.
 Frog   325 KTAKGEKYAMQEEFSRDGKALERFLQDYFDGKLKRYMKSEAIPESNDGPVKVVVAENFDEIVNDD 389

  Fly   174 DDIWLVEFFAPWCGHCKNLAPEWAKAAKEL--KGKVKLGALDATAHQSKAAEYNVRGYPTIKFFP 236
            ....|:||:||||||||||.|::.:..::|  ...:.:..:||||: ...::|.|||:|||.|.|
 Frog   390 SKDVLIEFYAPWCGHCKNLEPKYKELGEKLGDDPNIVIAKMDATAN-DVPSQYEVRGFPTIYFTP 453

  Fly   237 AGSKRASDAQEYDGGRTASDIVSWASDKHVANVP 270
            ||||:  ..:.|:|||..||.:|:.. |...|.|
 Frog   454 AGSKQ--KPKRYEGGREVSDFLSYLK-KEATNPP 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 39/92 (42%)
PDI_a_P5 157..262 CDD:239299 47/224 (21%)
P5_C 271..400 CDD:239281 112/489 (23%)
pdia3NP_989329.1 ER_PDI_fam 23..483 CDD:273457 104/465 (22%)

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