DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and pdia3

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001186666.1 Gene:pdia3 / 378851 ZFINID:ZDB-GENE-031002-9 Length:494 Species:Danio rerio


Alignment Length:479 Identity:111/479 - (23%)
Similarity:164/479 - (34%) Gaps:234/479 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LASILLLAFVVGSVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKL 68
            ||.:.|:||     :|....|| |:|.|..:||..:...|.| :|||:|||||||:.|.|||:..
Zfish     3 LALLFLVAF-----AAAARASD-VLEYTDDDFDSRIGDHDLI-LVEFFAPWCGHCKRLAPEYEAA 60

  Fly    69 AKALKGVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAI-------AEA 126
            |..|||:|.:..|:..|:|.:.|::||.|:||:|||...:.| ..|:|.|||..|       |..
Zfish    61 ATRLKGIVPLAKVDCTANSKVCGKYGVSGYPTLKIFRDGEDS-GGYDGPRTADGIVSHLKKQAGP 124

  Fly   127 ALAEVKKK-------------VQGVLGGGGGSSSG------------------------------ 148
            |..|:|.:             |.|....||.::.|                              
Zfish   125 ASVELKNEADFEKYIGDRDASVVGFFADGGSAAQGEFLKAASALRESYRFAHTNNEDLLKKHGID 189

  Fly   149 GSG---------SSSGDD--------------------------VIELTEDNFDKL--------- 169
            |.|         |:..:|                          ...:||||.|:|         
Zfish   190 GEGIILFRSPQLSNKFEDSSVLFTEDKFTSAKIKKFIQDNIFGICAHMTEDNKDQLKGKDLLVAY 254

  Fly   170 ----------------------------------------------------------------- 169
                                                                             
Zfish   255 YDVDYEKNPKGSNYWRNRVMKVAKGFLDQGKKLSFAVANKNRFSHDVSELGLDGSSGELPLVGIR 319

  Fly   170 -----------------------------------------------------------VLNSD- 174
                                                                       ::|.| 
Zfish   320 TAKGDKYVMKEEFSRDGKALERFLQDYFDGNLKRYLKSEPVPENNDGPVKVLVAENFDSIVNDDS 384

  Fly   175 -DIWLVEFFAPWCGHCKNLAPEWAKAAKELK--GKVKLGALDATAHQSKAAEYNVRGYPTIKFFP 236
             |: |:||:||||||||:|.|::.:..::|.  ..:.:..:||||: ...:.|.|.|:|||.|.|
Zfish   385 KDV-LIEFYAPWCGHCKSLEPKYKELGEKLSEDPNIVIAKMDATAN-DVPSPYEVSGFPTIYFSP 447

  Fly   237 AGSKRASDAQEYDGGRTASDIVSW 260
            ||.|:  :.::|:|||..||.:|:
Zfish   448 AGRKQ--NPKKYEGGREVSDFISY 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 41/92 (45%)
PDI_a_P5 157..262 CDD:239299 46/267 (17%)
P5_C 271..400 CDD:239281
pdia3NP_001186666.1 ER_PDI_fam 18..475 CDD:273457 105/459 (23%)
Blue background indicates that the domain is not in the aligned region.

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