DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Tmx1

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_006240240.1 Gene:Tmx1 / 362751 RGDID:1308455 Length:298 Species:Rattus norvegicus


Alignment Length:112 Identity:34/112 - (30%)
Similarity:54/112 - (48%) Gaps:11/112 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 LTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEW---AKAAKELKGKVKLGALDATAHQSKAA 222
            |.||.|...:|:. ...:.:.:||||..|:||.|||   |:..::|  :||:..:|.|.....:.
  Rat    52 LQEDTFKHFLLHC-KCNIHKSYAPWCPACQNLQPEWESFAEWGEDL--EVKVAKVDVTEQTGLSG 113

  Fly   223 EYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDKHVANV 269
            .:.:...|:|.....|..|     .|.|.||..|.:::.|:|...||
  Rat   114 RFIITALPSIYHCKDGEFR-----RYLGPRTKKDFINFISEKEWKNV 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 30/103 (29%)
P5_C 271..400 CDD:239281
Tmx1XP_006240240.1 PTZ00443 <70..242 CDD:185622 29/93 (31%)
Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold <70..149 CDD:469754 25/85 (29%)
Blue background indicates that the domain is not in the aligned region.

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