DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Pdia5

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001014147.1 Gene:Pdia5 / 360722 RGDID:1359236 Length:517 Species:Rattus norvegicus


Alignment Length:426 Identity:101/426 - (23%)
Similarity:173/426 - (40%) Gaps:92/426 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AFVVGSVSAFYSPSDG------------VVEL-TPSNFDREVLKDDAIWVVEFYAPWCGHCQSLV 62
            |..:.|:.||.....|            ||.: :..:|.|.:.|::...::.||||||..|:.::
  Rat   123 AVTLKSIVAFLKDPKGPPLWEEDPGAKDVVHIDSEKDFRRLLKKEEKPLLMMFYAPWCSMCKRIM 187

  Fly    63 PEYKKLAKALKGVVKVGSVNA--DADSTLSGQFGVRGFPTIKIF------------GANKKSPTD 113
            |.::|.|..::|...:..:|.  .....:..::.|||:|||..|            |:..:...:
  Rat   188 PHFQKAATQVRGHTVLAGMNVYPPEFENIKEEYNVRGYPTICYFEKGRFLFQYENYGSTAEDIVE 252

  Fly   114 Y--NGQRTAKAIAEAALAEVKKKVQGVLGGGGGSSSGGSGSSSGDDVIELTEDNFDKLVLNSDDI 176
            :  |.|.....:.|...|:                .|||       |..||:::||:.|.....:
  Rat   253 WLKNPQPPQPQVPETPWAD----------------EGGS-------VYHLTDEDFDQFVKEHSSV 294

  Fly   177 WLVEFFAPWCGHCKNLAPEWAKAAKELKGKVK----LGALDATAHQSKAAEYNVRGYPTIKFFPA 237
             ||.|.||||||||.:.||:..||:.|.|..:    |.|:|||.:::.|..:::..:||:|:|..
  Rat   295 -LVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDATINEALAERFHISAFPTLKYFKN 358

  Fly   238 GSKRASDAQEYDGGRTASDIVSWASDKHVANVPAP-------ELIEIINESTFETACEGKPLCVV 295
            |.::|..|.     ||....:.|..:......|.|       .::.::.::..||..:.|...|:
  Rat   359 GEQQAVPAL-----RTKKKFIEWMQNPEAPPPPEPTWEEQQTSVLHLVGDNFRETLKKKKHTLVM 418

  Fly   296 SVLPHILDCDAKCRNKFLDTLRTLGEKFKQKQWGWAWA-----EGGQQLALEESLEVGGFGYPAM 355
            ...|....|     .|.:.......:.||..:.....|     :..|.|..:||::    .||..
  Rat   419 FYAPWCPHC-----KKVIPHFTATADAFKDDRKIACAAVDCVKDKNQDLCQQESVK----AYPTF 474

  Fly   356 AVVNFKKMKFSVLKGSFSKD----GINEFLRDISYG 387
            ...::.|     |...:..|    |...|:|.:..|
  Rat   475 HYYHYGK-----LVEKYESDRTELGFTSFIRTLREG 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299 28/121 (23%)
PDI_a_P5 157..262 CDD:239299 39/108 (36%)
Thioredoxin_6 190..383 CDD:290560 46/212 (22%)
P5_C 271..400 CDD:239281 24/133 (18%)
Pdia5NP_001014147.1 PDI_b_PDIR_N 26..137 CDD:239365 4/13 (31%)
PDI_a_PDIR 150..254 CDD:239295 25/103 (24%)
ER_PDI_fam 166..501 CDD:273457 90/377 (24%)
PDI_a_PDIR 275..377 CDD:239295 39/114 (34%)
PDI_a_PDIR 396..499 CDD:239295 20/116 (17%)
Prevents secretion from ER. /evidence=ECO:0000255 514..517
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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