DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and pdia6

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_922915.2 Gene:pdia6 / 322160 ZFINID:ZDB-GENE-030131-879 Length:440 Species:Danio rerio


Alignment Length:444 Identity:253/444 - (56%)
Similarity:322/444 - (72%) Gaps:15/444 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRQLASILLLAFVVGSVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEY 65
            ||.|..:|..:..|.|....|:.||.||||.||||:|||::.|::|:|||||||||||:||.||:
Zfish     1 MRALLGVLACSLTVLSAYGLYTSSDDVVELNPSNFNREVIQSDSLWLVEFYAPWCGHCKSLAPEW 65

  Fly    66 KKLAKALKGVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAEAALAE 130
            ||.|.||||:||||:|:||..::|.||:||||||||||||.||..|.||.|.||.:||.:|||..
Zfish    66 KKAATALKGIVKVGAVDADQHNSLGGQYGVRGFPTIKIFGGNKHKPEDYQGGRTNQAIVDAALNA 130

  Fly   131 VKKKVQGVLGG--GGGSSSGGSGSSSGD--DVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKN 191
            ::..|:..|||  ||...|..||..:|:  ||:|||:||||:.||.|||:|||||||||||||||
Zfish   131 LRSLVKDRLGGKTGGSDYSRQSGGGAGNKKDVVELTDDNFDRTVLESDDVWLVEFFAPWCGHCKN 195

  Fly   192 LAPEWAKAAKEL----KGKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGR 252
            |.|||..||.|:    ||||:|.|.|||.||..|:.:.:||:||||.|    ::..:.::|.|||
Zfish   196 LEPEWTAAATEVKEQTKGKVRLAAEDATVHQGLASRFGIRGFPTIKVF----RKGEEPEDYQGGR 256

  Fly   253 TASDIVSWASDKHVANVPAPELIEIINESTFETACEGKPLCVVSVLPHILDCDAKCRNKFLDTLR 317
            |.||||:.|.:.:..|:|||||.|::||...:..||...||:::|||||||..|..||.:|:.::
Zfish   257 TRSDIVARALELYSDNIPAPELQEVLNEGILKKTCEDYQLCIIAVLPHILDTGASGRNSYLEVMK 321

  Fly   318 TLGEKFKQKQWGWAWAEGGQQLALEESLEVGGFGYPAMAVVNFKKMKFSVLKGSFSKDGINEFLR 382
            |:.||.|:|.|||.|.|.|.|:.||.||.:|||||||||.:|.:||||::||||||:.||:||||
Zfish   322 TMAEKHKKKMWGWLWTEAGAQMELEASLGIGGFGYPAMAAINSRKMKFALLKGSFSETGIHEFLR 386

  Fly   383 DISYGRGHTAPVRGAKKPAIVSVDPWDGKDGQLPTEEDIDLSDIDLD---KDEL 433
            ::|.|||.||.|.|...|.|.:|..||||||:||.|:||||||:|||   ||||
Zfish   387 ELSVGRGSTATVGGGALPKINTVQAWDGKDGELPMEDDIDLSDVDLDDLEKDEL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299 63/92 (68%)
PDI_a_P5 157..262 CDD:239299 64/108 (59%)
Thioredoxin_6 190..383 CDD:290560 103/196 (53%)
P5_C 271..400 CDD:239281 72/128 (56%)
pdia6NP_922915.2 ER_PDI_fam 25..262 CDD:273457 143/240 (60%)
PDI_a_P5 26..128 CDD:239299 68/101 (67%)
PDI_a_P5 161..266 CDD:239299 64/108 (59%)
P5_C 275..404 CDD:239281 72/128 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594880
Domainoid 1 1.000 216 1.000 Domainoid score I2649
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4198
Inparanoid 1 1.050 524 1.000 Inparanoid score I1212
OMA 1 1.010 - - QHG58248
OrthoDB 1 1.010 - - D290413at33208
OrthoFinder 1 1.000 - - FOG0000934
OrthoInspector 1 1.000 - - oto39441
orthoMCL 1 0.900 - - OOG6_100473
Panther 1 1.100 - - LDO PTHR45815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2193
SonicParanoid 1 1.000 - - X1799
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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