DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Pdilt

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_038963539.1 Gene:Pdilt / 293544 RGDID:1307822 Length:615 Species:Rattus norvegicus


Alignment Length:258 Identity:58/258 - (22%)
Similarity:105/258 - (40%) Gaps:40/258 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VVELTPSN----FDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAKALKGVVKVGSVNAD--A 85
            |:|..|.|    ::..:|....:::.:...|:    .:::..|::::|..:..:....||:|  .
  Rat   280 VIEFNPENKDLIYEMNILNHMLLFISKNSEPY----STIIRHYRQISKEFQNKILFVLVNSDEPK 340

  Fly    86 DSTLSGQFGVR--GFPTIKIFG----ANKKSPTDYNGQRTAKAIAEAALAEVKKKVQGVLGGGGG 144
            :..:...|.:.  ..|:::|..    |..|.|||.....:.|....:.|:...||.:        
  Rat   341 NKRIFEYFQISRVNVPSVQILNLSSDARYKMPTDNITFESLKKFCNSFLSRTAKKHK-------- 397

  Fly   145 SSSGGSGSSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKELKGK--- 206
            ||.........:.|.:|...||:.:|.:.:....|.|:|||...|:.|.|    ..:||..|   
  Rat   398 SSEEIPKYWDQEPVKKLVGKNFNVVVFDKEKDVFVMFYAPWSEKCRVLLP----LLEELGIKYQN 458

  Fly   207 ---VKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDKHV 266
               |.:..:|.||:..:.|  |...||..:.||..|:   :|..|.|..|......:. :.||
  Rat   459 HSTVIIAKIDITANDIQLA--NPEQYPFFRLFPTDSQ---EAVMYKGEHTMKGFCDFL-ESHV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 19/103 (18%)
PDI_a_P5 157..262 CDD:239299 31/110 (28%)
P5_C 271..400 CDD:239281
PdiltXP_038963539.1 ER_PDI_fam 69..523 CDD:273457 58/258 (22%)
Blue background indicates that the domain is not in the aligned region.

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