DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and Pdia6

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001004442.1 Gene:Pdia6 / 286906 RGDID:628688 Length:445 Species:Rattus norvegicus


Alignment Length:449 Identity:264/449 - (58%)
Similarity:326/449 - (72%) Gaps:20/449 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRQLASILLLAFVVG-----SVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQS 60
            ||.::...|:..:|.     :|||.||.||.|:|||||||:|||::.|::|:||||||||||||.
  Rat     1 MRVISMARLVLGLVSCTFFLAVSALYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 65

  Fly    61 LVPEYKKLAKALKGVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAE 125
            |.||:||.|.|||.|||||:||||...:|.||:||:||||||||||||..|.||.|.||.:||.:
  Rat    66 LTPEWKKAASALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVD 130

  Fly   126 AALAEVKKKVQGVLGG-GGGSSSGGSG---SSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAPWC 186
            |||:.:::.|:..||| .||.|||..|   |||..||:|||:|.|||.||:|:|:|:|||:||||
  Rat   131 AALSALRQLVKDRLGGRSGGYSSGKQGRGDSSSKKDVVELTDDTFDKNVLDSEDVWMVEFYAPWC 195

  Fly   187 GHCKNLAPEWAKAAKEL----KGKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQE 247
            ||||||.||||.||.|:    ||||||.|:|||.:|..|:.|.::|:||||.|..|....    :
  Rat   196 GHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPV----D 256

  Fly   248 YDGGRTASDIVSWASDKHVANVPAPELIEIINESTFETACEGKPLCVVSVLPHILDCDAKCRNKF 312
            ||||||.|||||.|.|....|.|.|||:|||||...:..||...||||:|||||||..|..||.:
  Rat   257 YDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKKTCEEHQLCVVAVLPHILDTGATGRNSY 321

  Fly   313 LDTLRTLGEKFKQKQWGWAWAEGGQQLALEESLEVGGFGYPAMAVVNFKKMKFSVLKGSFSKDGI 377
            |:.|..|.:|:|:|.|||.|.|.|.|..||.:|.:|||||||||.:|.:||||::||||||:.||
  Rat   322 LEVLLKLADKYKKKMWGWLWTEAGAQYELENALGIGGFGYPAMAAINARKMKFALLKGSFSEQGI 386

  Fly   378 NEFLRDISYGRGHTAPVRGAKKPAIVSVDPWDGKDGQLPTEEDIDLSDI---DLDKDEL 433
            |||||::|:|||.||||.|...|.|...:|||||||:||.|:||||||:   ||:||||
  Rat   387 NEFLRELSFGRGSTAPVGGGSFPNITPREPWDGKDGELPVEDDIDLSDVELDDLEKDEL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 64/92 (70%)
PDI_a_P5 157..262 CDD:239299 65/108 (60%)
P5_C 271..400 CDD:239281 76/128 (59%)
Pdia6NP_001004442.1 PDI_a_P5 31..133 CDD:239299 69/101 (68%)
PDI_a_P5 166..271 CDD:239299 65/108 (60%)
P5_C 280..409 CDD:239281 76/128 (59%)

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