DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and pdi4

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_594172.4 Gene:pdi4 / 2543474 PomBaseID:SPAC959.05C Length:632 Species:Schizosaccharomyces pombe


Alignment Length:346 Identity:63/346 - (18%)
Similarity:121/346 - (34%) Gaps:88/346 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAKALKGVVKVGS 80
            :.:||:     .||.|.|.:|:|          ||...|    ..:..|:..:.:|        .
pombe    41 NTTAFW-----FVEFTESKYDKE----------EFSVIW----NEVSMEFPDIRRA--------K 78

  Fly    81 VNADADSTLSGQFGVRGFPTIKIFG--------ANKKSPTDYNGQRTAKA-IAEAALAEVKKKVQ 136
            |..|.|.....|..:...|.:.:..        ..|...|..:.::..|: :....|.:.:.:..
pombe    79 VFCDLDLEFCAQQEIYDHPKVVVLKNGMWMRHVLEKNQITTKSARQFVKSHLGNCDLEQAENETD 143

  Fly   137 GVLGGGGGSSSGGSGSSSGDDVIELTED---------------NFDKLVLNSDDIWLVEFFAPW- 185
            .....|    ...|.|||.|...||.||               ||.:.:..::.:.....|..: 
pombe   144 CFSDDG----EYNSDSSSTDPAFELKEDQSWKHSSILRPLETLNFKRFLFGNEIMSKTRAFVMFV 204

  Fly   186 ----CGHCKNLAPEWAKAAKELKGKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQ 246
                |..|.:....|:...:....::|:..::....:.....::::.:||.:.|     :..|:.
pombe   205 SLKHCEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVF-----QGFDSI 264

  Fly   247 EYDGGRTASDIVSWASDKHVANVPAPEL----IEIINES---------TFETACEG------KPL 292
            :|:|......::|:::  .||:..|.::    ||.|..|         .|.|..|.      ..|
pombe   265 QYNGPLKYQQLLSYSN--QVASYQAIKIEEGDIESIENSHPVFFLVLYDFATTSEDFSIIERLKL 327

  Fly   293 CVVSVLPHILDCDAKC-RNKF 312
            .:..|.| :..|::|. .||:
pombe   328 QLAGVAP-LYICNSKALANKY 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 18/100 (18%)
PDI_a_P5 157..262 CDD:239299 18/124 (15%)
P5_C 271..400 CDD:239281 15/62 (24%)
pdi4NP_594172.4 PDI_a_family 183..278 CDD:239259 13/99 (13%)

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