DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and pdi1

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_592871.1 Gene:pdi1 / 2541460 PomBaseID:SPAC1F5.02 Length:492 Species:Schizosaccharomyces pombe


Alignment Length:484 Identity:107/484 - (22%)
Similarity:160/484 - (33%) Gaps:224/484 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SILLLAFVVGSVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAK 70
            |.||.||:..| ..|:..|..|.::.....: |::..|.:.:|:|||||||||::|.|||:..|.
pombe     4 SNLLAAFLAFS-GGFFCASAEVPKVNKEGLN-ELITADKVLMVKFYAPWCGHCKALAPEYESAAD 66

  Fly    71 AL-KGVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQR---------------T 119
            .| |..:.:..|:...:..|..::.:||:||:.:| .|.|..:.|:|.|               |
pombe    67 ELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVF-KNGKQISQYSGPRKHDALVKYMRKQLLPT 130

  Fly   120 AKAIAEAAL----------------------------AEV-----------KKKVQGVLGGG--- 142
            .|.|::..|                            |||           .|::...||..   
pombe   131 VKPISKDTLENFVEKADDLAVVAFFKDQKLNDTYTEVAEVMKDDFVFAASDDKELAKSLGSNFPG 195

  Fly   143 ------------------------------GGSS----------SGGSGSSSG------------ 155
                                          |.||          :.|....||            
pombe   196 IVAFTKDAAQDSDKLVYTGDWDPASIADFIGVSSIPLLDELNQMTFGKYQQSGLPLGIIFYNSTE 260

  Fly   156 ----------------------------------------------------------------- 155
                                                                             
pombe   261 SRDELYDVFQPLAKKYQDTLRFAFLDAVRYGAVAKQMNVESDWPAFVIANLKSMLKYPFPTTELT 325

  Fly   156 -----------------------------DDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKN 191
                                         :|::.|..||||.:|::.....||||:|||||||||
pombe   326 AKAMTKFVGDFVDGKLQPKIKSQPIPESQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKN 390

  Fly   192 LAPEWAKAAKELK--GKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTA 254
            |||.:.|.|:|..  ..|.:..:|||.:.   ...::.|:|||.||.|..|  .:...|:|.||.
pombe   391 LAPTYEKLAEEYSDDSNVVVAKIDATEND---ISVSISGFPTIMFFKANDK--VNPVRYEGDRTL 450

  Fly   255 SDIVSWASDKHVA---------NVPAPEL 274
            .|:.::. |||.:         :||||:|
pombe   451 EDLSAFI-DKHASFEPIKKEKESVPAPDL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 32/108 (30%)
PDI_a_P5 157..262 CDD:239299 43/106 (41%)
P5_C 271..400 CDD:239281 3/4 (75%)
pdi1NP_592871.1 ER_PDI_fam 23..464 CDD:273457 94/448 (21%)

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