DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaBP1 and pdi-1

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_497746.1 Gene:pdi-1 / 175472 WormBaseID:WBGene00003962 Length:485 Species:Caenorhabditis elegans


Alignment Length:490 Identity:106/490 - (21%)
Similarity:155/490 - (31%) Gaps:229/490 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SILLLAFVVGSVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAK 70
            |:..:..:|.|:.|..:.|:.|:.||.|||: |.:..:...:|:||||||.||:||.|:|.:.|.
 Worm     4 SVSFIFLLVASIGAVVADSENVLVLTESNFE-ETINGNEFVLVKFYAPWCVHCKSLAPKYDEAAD 67

  Fly    71 ALK---GVVKVGSVNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAE------- 125
            .||   ..:|:..|:|..:..|:.:|.|||:|||..|.:.|  ||.|.|.|....|.:       
 Worm    68 LLKEEGSDIKLAKVDATENQALASKFEVRGYPTILYFKSGK--PTKYTGGRATAQIVDWVKKKSG 130

  Fly   126 ---------AALAEVKKKVQGVLGG---------------------------------------- 141
                     ..|.|:|.|.:.|:.|                                        
 Worm   131 PTVTTVESVEQLEELKGKTRVVVLGYFKDAKSDAATIYNEVADSVDDAFFAVAGSAEVAAAASLN 195

  Fly   142 ----------GGGSSS--------------------------------------GG--------- 149
                      |..|.:                                      ||         
 Worm   196 EDGVALIRTDGDDSETSTIAEAEITNTIALKQWLHAYKLSAVTEFTHESAQEIVGGDLKKFHFLI 260

  Fly   150 --SGSSSGDDVI----------------------------------------------------- 159
              ...||.|:.|                                                     
 Worm   261 IRKSDSSFDETIAKFTEVAKKFRAKIVFVLLDVDVEENARILEFLGVDAKNTPANRIVSLADQVE 325

  Fly   160 -----------------------------ELTED------------NFDKLVLNSDDIWLVEFFA 183
                                         :|.||            ||:::.|:......|:|:|
 Worm   326 KFKPQEGEDFEAFTNSYLEGKSAQDLKAQDLPEDWNALPVKVLVASNFNEIALDETKTVFVKFYA 390

  Fly   184 PWCGHCKNLAPEWAKAAK--ELKGKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQ 246
            |||||||.|.|.|.:.|:  |....|.:..||||.::  .|:..|..:||:|.:||||   |...
 Worm   391 PWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNE--LADVKVNSFPTLKLWPAGS---STPV 450

  Fly   247 EYDGGRTASDIVSW-------ASDKHVANVPAPEL 274
            :|||.|.......:       ||:...|:....||
 Worm   451 DYDGDRNLEKFEEFVNKYAGSASESETASQDHEEL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299 40/95 (42%)
PDI_a_P5 157..262 CDD:239299 41/207 (20%)
P5_C 271..400 CDD:239281 2/4 (50%)
pdi-1NP_497746.1 ER_PDI_fam 23..474 CDD:273457 97/458 (21%)

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