DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaBP1 and Pdi

DIOPT Version :10

Sequence 1:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_061510732.1 Gene:Pdi / 1280308 VectorBaseID:AGAMI1_010164 Length:549 Species:Anopheles gambiae


Alignment Length:366 Identity:110/366 - (30%)
Similarity:156/366 - (42%) Gaps:96/366 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 AIAEAALAEVKKKVQGVLGGGGGSSSGGSGSSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAPWC 186
            |.|..|||..:.|.:                   |.|:.||:||||.::.|::.: ||||:||||
Mosquito    12 AFATVALAAEEVKTE-------------------DGVLVLTKDNFDSVIANNEFV-LVEFYAPWC 56

  Fly   187 GHCKNLAPEWAKAAKELKGK---VKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEY 248
            ||||.||||:|||||.|..|   :||..:|||.....|.:|.:|||||:|||.:||:     .:|
Mosquito    57 GHCKALAPEYAKAAKVLADKESNIKLAKVDATVEPELAEKYGIRGYPTLKFFRSGSQ-----VDY 116

  Fly   249 DGGRTASDIVSWASDKHVANVPAPELIEIINESTFETACEGKPLCVVSVLPHILDCDAKCRNKFL 313
            .|||....||||...|   ..||.:.:|.: |:..|...|..    |:|:....|.|:|....|:
Mosquito   117 TGGREQDTIVSWLEKK---TGPAAKELETV-EAAEEFLKENN----VAVVGFFKDRDSKEAKAFM 173

  Fly   314 DTLRTLGE-----------------------KFKQKQWGWAWAEGGQQLALEESLEVGGFGYPAM 355
            .|...:.:                       .||....|.|..||.   |.||:|:.........
Mosquito   174 STAVAVDDYPFGVTSSEEVYAKYEAKCGSVILFKHFDEGKAVFEGE---ATEEALKKFVTAQALP 235

  Fly   356 AVVNFKKMKFSVLKGSFSKDGINEFLRDISYGRGHTAP-VRGAKKPA--------IVSVDP---- 407
            .:|:|.......:.|...|..:..|   ||...||... |..||:.|        .|::|.    
Mosquito   236 LIVDFSHETAQKIFGGEIKSHLLFF---ISKEAGHLKEFVEPAKEVAKKFREQILFVTIDADQED 297

  Fly   408 -------WDGKDGQLPT------EEDI-----DLSDIDLDK 430
                   :..|..::|:      |||:     :.:|:..||
Mosquito   298 HTRILEFFGMKKDEVPSLRIIRLEEDMAKYKPETNDLSADK 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 56/107 (52%)
P5_C 271..400 CDD:239281 34/152 (22%)
PdiXP_061510732.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.