DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaBP1 and PDIA6

DIOPT Version :9

Sequence 1:NP_001285979.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001269633.1 Gene:PDIA6 / 10130 HGNCID:30168 Length:492 Species:Homo sapiens


Alignment Length:429 Identity:258/429 - (60%)
Similarity:319/429 - (74%) Gaps:15/429 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SVSAFYSPSDGVVELTPSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAKALKGVVKVGS 80
            :|:..||.||.|:|||||||:|||::.|::|:||||||||||||.|.||:||.|.|||.|||||:
Human    68 AVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGA 132

  Fly    81 VNADADSTLSGQFGVRGFPTIKIFGANKKSPTDYNGQRTAKAIAEAALAEVKKKVQGVLGG-GGG 144
            |:||...:|.||:||:|||||||||:||..|.||.|.||.:||.:|||:.:::.|:..||| .||
Human   133 VDADKHHSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDRLGGRSGG 197

  Fly   145 SSSGGSG---SSSGDDVIELTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKEL--- 203
            .|||..|   |||..||||||:|:|||.||:|:|:|:|||:||||||||||.||||.||.|:   
Human   198 YSSGKQGRSDSSSKKDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQ 262

  Fly   204 -KGKVKLGALDATAHQSKAAEYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDKHVA 267
             ||||||.|:|||.:|..|:.|.:||:||||.|..|....    :||||||.|||||.|.|....
Human   263 TKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPV----DYDGGRTRSDIVSRALDLFSD 323

  Fly   268 NVPAPELIEIINESTFETACEGKPLCVVSVLPHILDCDAKCRNKFLDTLRTLGEKFKQKQWGWAW 332
            |.|.|||:|||||...:..||...||||:|||||||..|..||.:|:.|..|.:|:|:|.|||.|
Human   324 NAPPPELLEIINEDIAKRTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLW 388

  Fly   333 AEGGQQLALEESLEVGGFGYPAMAVVNFKKMKFSVLKGSFSKDGINEFLRDISYGRGHTAPVRGA 397
            .|.|.|..||.:|.:|||||||||.:|.:||||::||||||:.|||||||::|:|||.||||.|.
Human   389 TEAGAQSELETALGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGG 453

  Fly   398 KKPAIVSVDPWDGKDGQLPTEEDIDLSDIDLD---KDEL 433
            ..|.||..:||||:||:||.|:||||||::||   ||||
Human   454 AFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLGKDEL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaBP1NP_001285979.1 PDI_a_P5 26..119 CDD:239299 62/92 (67%)
PDI_a_P5 157..262 CDD:239299 67/108 (62%)
Thioredoxin_6 190..383 CDD:290560 112/196 (57%)
P5_C 271..400 CDD:239281 76/128 (59%)
PDIA6NP_001269633.1 PDI_a_P5 78..180 CDD:239299 67/101 (66%)
PDI_a_P5 213..318 CDD:239299 67/108 (62%)
P5_C 327..456 CDD:239281 76/128 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158914
Domainoid 1 1.000 218 1.000 Domainoid score I2669
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4198
Inparanoid 1 1.050 522 1.000 Inparanoid score I1267
Isobase 1 0.950 - 0 Normalized mean entropy S1409
OMA 1 1.010 - - QHG58248
OrthoDB 1 1.010 - - D290413at33208
OrthoFinder 1 1.000 - - FOG0000934
OrthoInspector 1 1.000 - - oto90590
orthoMCL 1 0.900 - - OOG6_100473
Panther 1 1.100 - - LDO PTHR45815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2193
SonicParanoid 1 1.000 - - X1799
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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