DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chif and dbf4

DIOPT Version :9

Sequence 1:NP_523583.2 Gene:chif / 34974 FlyBaseID:FBgn0000307 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_001037970.1 Gene:dbf4 / 733748 XenbaseID:XB-GENE-972991 Length:663 Species:Xenopus tropicalis


Alignment Length:617 Identity:122/617 - (19%)
Similarity:218/617 - (35%) Gaps:194/617 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TTSHSTAAASATAATPPKVKVIKSKRPLCHFKFYLDICDHQLAKRIESDIKALGGHLEFFLSDDI 80
            |..:.|....|....|...||           ||||:....:::::|.|||.|||.:|.|||.:|
 Frog     7 TVKNPTGKVQADICKPFSGKV-----------FYLDLTSKLISEKLEKDIKELGGTVEGFLSKEI 60

  Fly    81 THFVTDKPEV--------------------IGGTSGTPGTPSTPGTPTSHYQQNDGSARKPNQRQ 125
            ::.:|.|.|.                    .|.:|.:||....|         .:|::.|.|::.
 Frog    61 SYLITSKKEAKCVKTLKYVCSVPSPEPAQNTGESSTSPGNRRLP---------QEGNSSKKNEKS 116

  Fly   126 --SRADAILSRVRRSTVGVVNSGNSTPTTSLKRSYTIWQTDYAQRFIKRIQTELKQYLEGKKEGG 188
              ||..:::.:..:..  .:...||..:.:|.....|...:.|:|:|::.::.|:|.    |:..
 Frog   117 LVSRGKSLVKKAIKEQ--EILPKNSILSNALNWGVKILHVEEAKRYIEKKKSSLQQV----KKSQ 175

  Fly   189 GGSTSASPHHI-------QLKKQYVKIESVKRNYRPYYHLIKQPDDWPKIDLSSEDGAFRLLTKS 246
            ....|.|.|..       :||..|:|:|.....|||.|.::.|               ||....:
 Frog   176 PVVKSESKHPARRKVKPQKLKSPYIKVEDCSCQYRPLYLVLPQ---------------FRSFQNT 225

  Fly   247 KTK-----DKEHSMTRKPLGSRTSQKDKQAAGEAKPLQHPSLQELKKQSAIPNSPRSNCREPIDS 306
            .:.     ||:..:.:|      ..:.||:..:...:|..:           |:.....:|    
 Frog   226 TSNYLVEVDKKADVGQK------LAETKQSINKTGHVQDGA-----------NNANIKLKE---- 269

  Fly   307 SEKQGGVCEICKLEYDILNIHLQSKDHELFAKNSDNFLALDTLIQS------------------- 352
             :|:.|.||.|..:||.|..|:.|..|:.::: |..:..:|.||.:                   
 Frog   270 -QKKHGYCECCLKKYDSLESHILSPQHKNYSE-SAYYQVVDDLISTFEFDFVDWSKYKNGRKSVG 332

  Fly   353 -----------------SADVNRFLEEEPVESELDMDVDESLSNEELQSPRQRPSPALREK---- 396
                             ::..|.|.|.....:.|.   :.:|.:....|....|:|.....    
 Frog   333 ILMLTEKYKAEGQERNEASKANTFSERVSATTPLQ---ENTLKDPYATSCSVPPTPVCNTDPMFS 394

  Fly   397 ------SKRITKGKHSSEKF-QGVAVASPQTPFPGAKKVQGNSPGSLSELQRQEHPTTAAATPTT 454
                  |..:...|::::.| |.||.:.|      |..::.|.||||.|.:        .:....
 Frog   395 LPSPVGSAELCNKKYTTDNFEQLVATSVP------ALCLKDNLPGSLGERE--------MSVVYN 445

  Fly   455 NSGRRKTQNSGLSPPK---RAMLPPSSIYKVVETREECATPPRGRGRPPNQVDSPSLI------- 509
            .:.:.:|.:..:..||   .|...||:|...|                |.:||:.:..       
 Frog   446 ETKQNETIDHTMERPKIGWDASNIPSNILLYV----------------PQKVDAVAQYANVSLKG 494

  Fly   510 -VKFQKIRQTELQRLNGE-----AENFMFPRT 535
             :...|:...:.....|:     .:|..||:|
 Frog   495 NIHCSKLTACQAALTYGKMDPAVCDNITFPKT 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chifNP_523583.2 DBF4 <40..350 CDD:227399 75/343 (22%)
ZnF_DBF 307..355 CDD:128854 15/83 (18%)
dbf4NP_001037970.1 BRCT 21..>74 CDD:366152 22/63 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..119 8/43 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..193 4/25 (16%)
zf-DBF 269..316 CDD:383085 16/52 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003541
OrthoInspector 1 1.000 - - oto102618
Panther 1 1.100 - - LDO PTHR15375
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4510
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.040

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