DRSC/TRiP Functional Genomics Resources

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Protein Alignment chif and dbf4b

DIOPT Version :9

Sequence 1:NP_523583.2 Gene:chif / 34974 FlyBaseID:FBgn0000307 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_695130.5 Gene:dbf4b / 566753 ZFINID:ZDB-GENE-121214-269 Length:831 Species:Danio rerio


Alignment Length:752 Identity:156/752 - (20%)
Similarity:259/752 - (34%) Gaps:198/752 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FYL-DICDHQLAKRIESDIKALGGHLEFFLSDDITHFVTDKPEVIGGTSGTPGTPSTPGTPTSHY 111
            ||| |:..|| :..:...|..|||.::.||:.|:...||      |........|......|...
Zfish    14 FYLHDVKRHQ-SVTLTDIINRLGGKVDSFLTKDVNVVVT------GIKEAHNDLPVDSSCATGRK 71

  Fly   112 QQNDGSARKPNQRQSRADAILSRVRRSTVGVVNSGNSTPTTSLKRSYTIWQTDYAQRFIKRIQTE 176
            |   ....||....||..|:|.:       .::|.:.:.::.|..:.::....|......:|.:.
Zfish    72 Q---SGTSKPLVCGSRGKALLEK-------AIHSNDKSQSSVLANARSLGVKVYHVDGFLKIISH 126

  Fly   177 LKQYLEGKKEGGGGSTSASPHHIQLKKQYVKIESVKRNYRPYYHLIKQPDDWPKIDLSSEDGAFR 241
            |.|.:...|:......:.......||..|:|:|...|.:||||   .|..::|.:..|.:...|.
Zfish   127 LDQKMRTAKKKRSKQIAPQVKAGVLKSPYLKVEDCSRKFRPYY---AQTLNFPSMSYSGKCSPFE 188

  Fly   242 LL-TKSKT-KDKEHSMTRKPLGSRTSQKDKQAAGEAKPLQHPSLQELKKQSAIPNSPRSNCREPI 304
            || ...|| :.|:.:.::...|     |.|:.......||            :|.:..:..|.| 
Zfish   189 LLRIPQKTDRSKDENPSKDHFG-----KKKEPTSSCHRLQ------------VPLTASATLRGP- 235

  Fly   305 DSSEKQGGVCEICKLEYDILNIHLQSKDHELFAKNSDNFLALD--------------------TL 349
              ::|..|.||.|.:.:...:.||:|:.|..|.:...|:..:|                    ||
Zfish   236 --TKKSSGYCECCHVAFKDQHEHLESEMHRSFVQKDSNYTEVDQLTATMNANFVCIPNEEVDPTL 298

  Fly   350 IQSSADVNRFLEEEPVE-SELDMDVDESLS-NEE-LQSPRQRPS---PALREK-SKRITKGKHSS 407
            ::|||.::      |:. :.|...|..::| ||| ||:|..|..   |::.|. :..:.|.::|.
Zfish   299 MKSSAGLS------PLHLNHLTEMVQNTVSDNEEFLQTPLVRDCGHLPSITELFTPTLDKTENSP 357

  Fly   408 EKFQGVAVASP------------QTPFPGA-------------KKVQ------------------ 429
            :..|.::..|.            |...|.|             .||.                  
Zfish   358 KPIQSLSSFSTHHQNTTSHLYPMQNNCPDAFDHDKAGVYFTCTTKVNEFQPDVLCMDLIQHSVSS 422

  Fly   430 -GNSPGSLSELQRQEHP----TTAAATP-TTNSGRRKTQNSGLSPPKRAMLPPSSIYKVVETREE 488
             ..:|.|.|.|...|..    |..:..| ||:.|....:|...|             :|......
Zfish   423 IDKNPKSFSSLTSSEAKLNMLTLCSKIPCTTSGGEYDPENQNQS-------------EVAHGHLV 474

  Fly   489 CATPPRGRGRPPNQV---------------DSPSLIVKFQKIRQTELQR---------------- 522
            |..|....|...|.|               :||.::::.:|  ...|||                
Zfish   475 CHMPRNLEGACSNTVFSQKLVWNQGLSMCLNSPKILLQGEK--DGNLQRCGQFEFDHRLLLSTKK 537

  Fly   523 -LNGEAENFMFPRTAVPTT-------RSSSELP----TDVDRQTTSD--VRGRYSISSASLDTST 573
             |.|...:..|..|..|.:       .|.|..|    ...||..|..  :..|..|....:...:
Zfish   538 YLQGIVRSPEFGMTYFPLSCFLPFPHLSDSPFPKVNKKKRDRSFTQSPKLAKRRKICHNGMQNPS 602

  Fly   574 SEAETK-ESSGLPTSIRKRAQAVGRRRKVGGAAAQDV-FQRQLSTGSSSSNSNQQRF--PSAPIQ 634
            .:..|. :.|.:|:::......|....|:......:: |..|..|.    :|.::.|  ||....
Zfish   603 WDCSTPCKRSSVPSALALAVSKVDFTTKMNNRPGDEISFADQTQTW----HSRKKYFTSPSTHCL 663

  Fly   635 PEE-GPQPQPKPQL----KIKIKQEQLVATRKSSRTA 666
            |.: |.|.....:|    :.||..|..|.:|.::.::
Zfish   664 PNQVGQQDNATSKLGDHVERKIFPEDPVESRVTTHSS 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chifNP_523583.2 DBF4 <40..350 CDD:227399 72/324 (22%)
ZnF_DBF 307..355 CDD:128854 16/67 (24%)
dbf4bXP_695130.5 zf-DBF 241..282 CDD:284866 11/40 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575142
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5067
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003541
OrthoInspector 1 1.000 - - otm25735
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15375
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4510
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.960

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