DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chif and spo6

DIOPT Version :9

Sequence 1:NP_523583.2 Gene:chif / 34974 FlyBaseID:FBgn0000307 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_596287.1 Gene:spo6 / 2540044 PomBaseID:SPBC1778.04 Length:474 Species:Schizosaccharomyces pombe


Alignment Length:469 Identity:96/469 - (20%)
Similarity:160/469 - (34%) Gaps:174/469 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDKQSASRLATTTSHS-----------------TAAASATAATPP-------------------- 32
            |||:.....|..||.|                 :|.|:|..|.||                    
pombe    45 SDKELCQTAACATSCSDWYPQQQTHMPHQNAFDSAKATAKMALPPTAFSNYCVKPSLTRNKDIPR 109

  Fly    33 -KVKVIK-------SKRPLCHFKFYLDICDHQLAKRIESDIKALGGHLEFFLSDDITHFVTDK-- 87
             .::|.|       .:....:|.||.|..|.::.:|:...|..||..:....:.::|||:|.:  
pombe   110 TSIRVSKLRYWQRDYRLAFPNFIFYFDNVDEEIKRRVTQKINNLGAKVATLFTFEVTHFITTRTT 174

  Fly    88 -PEVIGGTSGTPGTPSTPGTPTSHYQQND--GSARKPNQRQSRADAILSRVRRSTVGVVNSGNST 149
             ||:.                    |.||  ..::..|.:....|.:|:|:              
pombe   175 DPEMC--------------------QPNDVLYLSKTANMKIWLLDKLLNRI-------------- 205

  Fly   150 PTTSLKRSYTIWQTDYAQRFIKRIQTELKQYLEGKKEGGGGSTSASPHHIQLK------KQYVKI 208
                   .:|:..:|   ..:....:.|:..|:|:|..|   ||....::..|      :.::.|
pombe   206 -------LFTLLNSD---SLVNTSASCLQSLLDGEKVYG---TSDKDFYVPSKNVEYFREYFLCI 257

  Fly   209 ESVKRNYRPYYHLIKQPDD--------WPKIDLSSE------DGAFRLLTKSKTKDKEHSMTRKP 259
            ..:.:.|:|.  .:::.:.        ||.:.::::      .|..|.|..:|.....|.: ||.
pombe   258 RDLSQYYKPI--AVREWEKTLDSGEILWPSLAITAQGRCPFNTGRRRELKITKHNHPAHEI-RKQ 319

  Fly   260 LGSRTSQKD-------------KQAAGE----------AK--PLQHPSLQEL------------- 286
            |.|.|:|.:             :|..|:          ||  |.:.|..:.|             
pombe   320 LLSCTNQTNQNNVVKNSASVLVRQIMGDYNITESAVDGAKQMPTEFPKPENLLPVEKRAAMSPLN 384

  Fly   287 -------KKQSAIPN-SPRS--NC--REPIDSS----EKQGGVCEICKLEYDILNIHLQSKDHEL 335
                   .||:.:.| |||.  |.  .:|:...    |.:.|.||.|...|..|..||..|.|..
pombe   385 LLEPRLINKQNTLANQSPRQPPNAFDADPLAHKKVKIETKSGYCENCCERYKDLERHLGGKHHRR 449

  Fly   336 FAKNSDNFLALDTL 349
            ||:..:||..||.|
pombe   450 FAEKDENFQGLDDL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chifNP_523583.2 DBF4 <40..350 CDD:227399 81/389 (21%)
ZnF_DBF 307..355 CDD:128854 18/47 (38%)
spo6NP_596287.1 DBF4 7..471 CDD:227399 96/469 (20%)
BRCT 130..>180 CDD:237994 15/69 (22%)
Dfp1_Him1_M 183..296 CDD:285794 20/141 (14%)
ZnF_DBF 421..469 CDD:128854 18/43 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 40 1.000 Domainoid score I3727
eggNOG 1 0.900 - - E1_COG5067
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003541
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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