DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4278 and nif3l1

DIOPT Version :9

Sequence 1:NP_609790.1 Gene:CG4278 / 34970 FlyBaseID:FBgn0014092 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001025139.1 Gene:nif3l1 / 574421 ZFINID:ZDB-GENE-050706-80 Length:347 Species:Danio rerio


Alignment Length:353 Identity:123/353 - (34%)
Similarity:173/353 - (49%) Gaps:101/353 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LAAVVKELENFAPTSWAEKWDNVGLLIEPHREKQIKKILLTNDLTEPVVKEALEKEAELIISYHP 77
            |..|::.||..||.|.||.|||||||:||.|.:.||.||||||||..|:.||:..:.:||:||||
Zfish     3 LKGVLEVLEQLAPLSLAESWDNVGLLVEPSRPRPIKTILLTNDLTAAVMDEAVGMKCDLIVSYHP 67

  Fly    78 PIFKPLTRITQSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWL------------------ 124
            |:|:|..|:.|..||:|:....:.|.|.::||||:||...|||||||                  
Zfish    68 PLFRPFKRLLQKDWKQRLAVRAIENGIGIFSPHTSWDSVEGGVNDWLVGGMGRGKVSVLSQAVSS 132

  Fly   125 ----------------------------------------------------------------- 124
                                                                             
Zfish   133 GAQKHRVEFSCMDDGEVNSLLEQLRHTEGSETFQCTRINSESGGQQVNLTCGSSALTGAVQILLS 197

  Fly   125 ----SKAVNIISIRPLEPELGAPP--GTGSGR--YIETKMELSQVVESLQKRIRNSVHVALAVG- 180
                ||::||..::       .||  |.|.||  .:|..:.:|..|:.::..: ...|:.||:| 
Zfish   198 HPHASKSLNITQVQ-------QPPLLGCGQGRLSVLEEPVSVSTAVQKMKTHL-GLPHLRLALGD 254

  Fly   181 -HTPKTLIQSVGICAGSGASLLKGIQADLIITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFLHE 244
             .|..:::::|.:|||||||:::|:.|||.|||||||||||:.....|:|:|..|||||||||..
Zfish   255 QQTLDSMVKTVAVCAGSGASVIQGVTADLYITGEMSHHEVLDAVSKGTSVILSEHSNSERGFLGV 319

  Fly   245 FCPILAKSLNEECLVFVSEVDKDPLVTV 272
            |...|:..|:....:.:|:.|:|||..|
Zfish   320 FRERLSARLDHTVSIVISQTDRDPLQVV 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4278NP_609790.1 NIF3 16..251 CDD:280036 115/327 (35%)
nif3l1NP_001025139.1 NIF3 6..327 CDD:280036 115/328 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596505
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0327
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5881
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54155
OrthoDB 1 1.010 - - D1293706at2759
OrthoFinder 1 1.000 - - FOG0005738
OrthoInspector 1 1.000 - - oto40721
orthoMCL 1 0.900 - - OOG6_102764
Panther 1 1.100 - - LDO PTHR13799
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R811
SonicParanoid 1 1.000 - - X4727
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.750

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