DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4278 and nif3l1

DIOPT Version :9

Sequence 1:NP_609790.1 Gene:CG4278 / 34970 FlyBaseID:FBgn0014092 Length:292 Species:Drosophila melanogaster
Sequence 2:XP_012825866.2 Gene:nif3l1 / 549109 XenbaseID:XB-GENE-1016729 Length:372 Species:Xenopus tropicalis


Alignment Length:347 Identity:125/347 - (36%)
Similarity:173/347 - (49%) Gaps:89/347 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LAAVVKELENFAPTSWAEKWDNVGLLIEPHREKQIKKILLTNDLTEPVVKEALEKEAELIISYHP 77
            |.:||..|....|.:.||.|||||||:||....|:.|:||||||||.|:.||::..|.:|:||||
 Frog    28 LGSVVSCLNVLTPPALAEGWDNVGLLVEPSPPHQVHKLLLTNDLTEDVLDEAIDTGANMILSYHP 92

  Fly    78 PIFKPLTRITQSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWLSKA--------------- 127
            |:||.|.||||..||||:|...|...:|:|||||:.|..:.||||||::|               
 Frog    93 PVFKALKRITQKSWKERLVVKALEKRLAVYSPHTSCDALANGVNDWLARALGPSKSVPLRASTSL 157

  Fly   128 --------------------------------------------------------VNIISIRPL 136
                                                                    |.::||...
 Frog   158 TYPGGVGHLLEFRLDPAGNIMSRLNGIQGVSVCTSTARHDGDNGTRVSLSCSQNALVEVLSILSE 222

  Fly   137 EPE---------LGAPP--GTGSGRYIETKMELSQVVESLQKRIRNSVH-----VALAVGHTPKT 185
            ||:         |..||  .||.|| :.|..|...:..:|: ||:..:|     :||..|.|.::
 Frog   223 EPQVYNSLQLLTLQKPPLVDTGMGR-LCTLSEPVSIAAALE-RIKKHLHLPHLRLALGRGRTLES 285

  Fly   186 LIQSVGICAGSGASLLKGIQADLIITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFLHEFCPILA 250
            .:....:|||||:|:|.|:.|:|.:|||||||:||:......:|:||.|||||||:|.|....:.
 Frog   286 SVSMAAVCAGSGSSILSGVPAELYLTGEMSHHDVLDAVAEGRSVVLCEHSNSERGYLQELGGQIR 350

  Fly   251 KSLNEECLVFVSEVDKDPLVTV 272
            ::|..:..|.||:.|:|||..|
 Frog   351 QALEGQVQVVVSQRDRDPLQVV 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4278NP_609790.1 NIF3 16..251 CDD:280036 115/321 (36%)
nif3l1XP_012825866.2 NIF3 31..352 CDD:396378 115/322 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5881
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54155
OrthoDB 1 1.010 - - D1293706at2759
OrthoFinder 1 1.000 - - FOG0005738
OrthoInspector 1 1.000 - - oto104381
Panther 1 1.100 - - LDO PTHR13799
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4727
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.030

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