DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4278 and SPCC126.12

DIOPT Version :9

Sequence 1:NP_609790.1 Gene:CG4278 / 34970 FlyBaseID:FBgn0014092 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_588455.1 Gene:SPCC126.12 / 2539063 PomBaseID:SPCC126.12 Length:278 Species:Schizosaccharomyces pombe


Alignment Length:274 Identity:105/274 - (38%)
Similarity:148/274 - (54%) Gaps:17/274 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KLAAVVKELENFAPTSWAEKWDNVGLLIE-PHREKQIKKILLTNDLTEPVVKEAL-EKEAELIIS 74
            ||..||:.:.|   ...|:.|||.|||:| |........:|||.||||.|.:||: .|....|::
pombe     9 KLKKVVESIYN---PKLADSWDNTGLLLEAPFPRTNASSVLLTIDLTEKVAEEAISNKLVSSIVA 70

  Fly    75 YHPPIFKPLTRITQSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWLSKAV-----NIISIR 134
            |||.||:.|..||....::|.:....|..|.:||||||.|....||||||::.:     ||.|:.
pombe    71 YHPIIFRGLKAITMEDPQQRSLLKLAAEGIHVYSPHTAVDAAVDGVNDWLAQGIAGGRNNIKSVV 135

  Fly   135 PLEPELGAPPGTGSGRYIETKM--ELSQVVESLQKRIRNSVHVALAVGHTPKTLIQSVGICAGSG 197
            |.:.........|.||..|.|:  .|.::|:. .|.:....:|.:...:...:.|..|.:|||||
pombe   136 PTQQNSVMAEAEGYGRICELKIPTTLRELVQR-AKELTGLQYVQVCAPNGLDSHISKVSLCAGSG 199

  Fly   198 ASLLKGIQADLIITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFLHE-FCPILAKSLNEECL--- 258
            .|::....|||..|||:|||:||.......:|:||.|||:|||:|.: .|..||.|.::|.:   
pombe   200 GSVVMNTDADLYFTGELSHHQVLAAMAKGISVILCGHSNTERGYLKDVMCQKLASSFHKEGVDAN 264

  Fly   259 VFVSEVDKDPLVTV 272
            |.||.:|.|||.|:
pombe   265 VIVSSMDADPLTTM 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4278NP_609790.1 NIF3 16..251 CDD:280036 92/244 (38%)
SPCC126.12NP_588455.1 NIF3 9..248 CDD:280036 92/242 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 146 1.000 Domainoid score I1139
eggNOG 1 0.900 - - E1_COG0327
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5881
Inparanoid 1 1.050 160 1.000 Inparanoid score I1250
OMA 1 1.010 - - QHG54155
OrthoFinder 1 1.000 - - FOG0005738
OrthoInspector 1 1.000 - - oto101573
orthoMCL 1 0.900 - - OOG6_102764
Panther 1 1.100 - - LDO PTHR13799
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R811
SonicParanoid 1 1.000 - - X4727
TreeFam 1 0.960 - -
1413.860

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