DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzy and AMA1

DIOPT Version :9

Sequence 1:NP_477501.1 Gene:fzy / 34968 FlyBaseID:FBgn0001086 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_011741.5 Gene:AMA1 / 853140 SGDID:S000003457 Length:593 Species:Saccharomyces cerevisiae


Alignment Length:572 Identity:145/572 - (25%)
Similarity:235/572 - (41%) Gaps:164/572 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SSEGKTKKSNTTPSKTPGGGDRFIPNRAATN----------FELAH------------------F 103
            :|:...|..|::.:.|.  .|||||...:.|          |::::                  |
Yeast    11 NSKSSNKNINSSGNSTE--VDRFIPKSVSRNAYKSIPMLNGFDISYSELCEKSPSPERLSSPEFF 73

  Fly   104 LVNKDSGD----KSDEENDKATSSNSNESNV----QASAHKGDRQKLISE--------VAQVGDS 152
            ...:::|.    .:..|...::.|:|:||.|    .|.|.:.|..||..|        ...:|..
Yeast    74 NELRNTGHYESISTTNEFSMSSISSSSESQVTRSGSARASRNDYSKLTKEQKDHRKNIAHSLGFQ 138

  Fly   153 KGGRILCYQ---------NKA-------------------------------------PAAPETH 171
            ...|:..::         |||                                     .|:|:..
Yeast   139 LPDRVFTFETTSAEILEKNKAIKNCFGPGSCAEIRSTFDFSTLSPDVARYYIANSNARSASPQRQ 203

  Fly   172 -NNPLKVVYSIKTPISTKSGSRYIPTTSERILDAPDFINDYYLNLMDWS-ADNIVAVALGSCVYL 234
             ..|.|.|.|            :||   .|:||||...||:|.||:.|| ..|.|.|.||..||:
Yeast   204 IQRPAKRVKS------------HIP---YRVLDAPCLRNDFYSNLISWSRTTNNVLVGLGCSVYI 253

  Fly   235 WNAQTGNIEQLTE---FEEGDYAGSLSWIQEGQILAIGNSTGAVELWD---------CSKVKRLR 287
            |:.:.|.:..|..   .|:.|....:|:........:|...|.:.|:|         .::.:.:.
Yeast   254 WSEKEGAVSILDHQYLSEKRDLVTCVSFCPYNTYFIVGTKFGRILLYDQKEFFHSSNTNEKEPVF 318

  Fly   288 VMDGHSAR-VGSLAW------NSFLVSSGSRDGTI-------VHHDVR--AREHKL--------- 327
            |....|.: :..|.|      ..|.|  |..:|.:       :|..::  ::..||         
Yeast   319 VFQTESFKGICCLEWFKPGEICKFYV--GEENGNVSLFEIKSLHFPIKNWSKRQKLEDENLIGLK 381

  Fly   328 --STLSGHTQEVCGLKWSTDFKYLASGGNDNLVNVWSAASGGVGTATDPLHKF-NDHQAAVRALA 389
              ||.....|:|||:..:.....||.|||||..::|.     :.....|:.|| ..|:|||:|:|
Yeast   382 LHSTYQAQAQQVCGISLNEHANLLAVGGNDNSCSLWD-----ISDLDKPIKKFVLPHKAAVKAIA 441

  Fly   390 WCPWQPSTLASGGGTADRCIKFWNVNNGTLMKSVDSKSQVCSLLFSRHYKELISAHGFANNQ--- 451
            :|||..|.||:|||:.|||||||:.:.|||:..:.:..||.||::|..:|::::..||.:.:   
Yeast   442 FCPWSKSLLATGGGSKDRCIKFWHTSTGTLLDEICTSGQVTSLIWSLRHKQIVATFGFGDTKNPV 506

  Fly   452 -LTIWKYPTMVKQADL-TGHTSRVLQMAMSPDGSTVISAGADETLR---LWN 498
             :|::.||.:.|..:: :.:..|||...:||....:..|..|||:|   |||
Yeast   507 LITLYSYPKLSKLLEVRSPNPLRVLSAVISPSSMAICVATNDETIRFYELWN 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzyNP_477501.1 WD40 <208..500 CDD:225201 102/340 (30%)
WD40 216..498 CDD:238121 95/330 (29%)
WD40 repeat 256..291 CDD:293791 6/43 (14%)
WD40 repeat 297..332 CDD:293791 11/60 (18%)
WD40 repeat 337..373 CDD:293791 11/35 (31%)
WD40 repeat 386..424 CDD:293791 21/37 (57%)
WD40 repeat 429..467 CDD:293791 11/42 (26%)
WD40 repeat 473..513 CDD:293791 12/29 (41%)
AMA1NP_011741.5 WD40 repeat 234..271 CDD:293791 12/36 (33%)
WD40 266..561 CDD:421866 85/300 (28%)
WD40 repeat 276..321 CDD:293791 6/44 (14%)
WD40 repeat 328..374 CDD:293791 9/47 (19%)
WD40 repeat 394..432 CDD:293791 13/42 (31%)
WD40 repeat 437..474 CDD:293791 22/36 (61%)
WD40 repeat 482..523 CDD:293791 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346539
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19918
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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