DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzy and cdc20b

DIOPT Version :9

Sequence 1:NP_477501.1 Gene:fzy / 34968 FlyBaseID:FBgn0001086 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_004910413.1 Gene:cdc20b / 100497347 XenbaseID:XB-GENE-1013871 Length:519 Species:Xenopus tropicalis


Alignment Length:540 Identity:177/540 - (32%)
Similarity:251/540 - (46%) Gaps:96/540 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 WKKKLEASLNGSVNTTRSVLSVSYNTSFSGVQAPTKTPGKSSEGKTKKSNTTPSKTPGGGD---- 87
            |  |||...:..|.....::       :.||.   ||.||......|.|....:|||.|..    
 Frog     3 W--KLEKISSRRVRAEEDMM-------WEGVM---KTLGKDLRWSRKYSMQKMNKTPDGRSSYSR 55

  Fly    88 --RFIPNRAATNFELAHFLVNKDSGDKSDEENDKATSSNSNESNVQ------------------- 131
              |.|..|.|.:...|...|:.......|:......||:.:|...|                   
 Frog    56 FKRSIMKRRACHVPFASSPVSTKWCQNMDQIQGTGLSSSPSEELCQTPEPLVLLPYLTEIPITAI 120

  Fly   132 ------------ASAHKGDR---QKLISE-----------VAQVGDSKGGRILCYQNKAPAAPET 170
                        .||.|..:   :||:|:           :..|.|.|.|..:           .
 Frog   121 PDCAQKPPSLKDTSAPKRTQKTSKKLLSQTRLKFLQEQNFLQTVEDFKRGSCI-----------R 174

  Fly   171 HNNPLKV----VYSIKTPISTKSG------SRYIPTTSERILDAPD-------FINDYYLNLMDW 218
            |::.:|:    ....|..:.||..      ::.:...|..||. ||       ..|||||||:||
 Frog   175 HDSNIKICEKDTCMWKGCLQTKKNKSLGQKTQKVHICSHTILQ-PDIRLHIIGLHNDYYLNLLDW 238

  Fly   219 SADNIVAVALGSCVYLWNAQTGNIEQLTEFE-EGDYAGSLSWIQEGQILAIGNSTGAVELWDCSK 282
            :::|:||:.|.|..|:::.:...:.|..... ...|..|:|||..|..||||.|:|.|:|||...
 Frog   239 NSENLVAIGLKSTAYIFSGENRTVTQKIHLSCPATYVSSVSWISSGTCLAIGTSSGEVQLWDIET 303

  Fly   283 VKRLRVMDGHSARVGSLAWNSFLVSSGSRDGTIVHHDVRAREHKLSTLSGHTQEVCGLKWSTDFK 347
            .||||.|.||.:.||:|:||:.::|||||.|.|.|||||..||.:.||. |.|.:|.||||....
 Frog   304 QKRLRNMLGHMSVVGALSWNNHILSSGSRLGHIHHHDVRIAEHHIGTLQ-HKQGICSLKWSPCGN 367

  Fly   348 YLASGGNDNLVNVWSAASGGVGTATDPLHKFNDHQAAVRALAWCPWQPSTLASGGGTADRCIKFW 412
            .||||.:|..:.:|....|.....:..|:.  .|..||:|:.||||...|||.|||..|..|:.|
 Frog   368 KLASGSSDGDLKIWPCDPGETKLKSPLLNM--PHPTAVKAMNWCPWLSDTLAVGGGMTDGLIRIW 430

  Fly   413 NVNNGTLMKSVDSKSQVCSLLFSRHYKELISAHGFANNQLTIWKYPTMVKQADLTGHTSRVLQMA 477
            :.|:|..:.|.::.||:||||:....|||::.||.:.||:|||:||:::|..|..||..|||.:|
 Frog   431 DTNSGKNIHSANTNSQICSLLWLPQTKELLTGHGPSRNQMTIWQYPSLLKMNDYYGHKGRVLHLA 495

  Fly   478 MSPDGSTVISAGADETLRLW 497
            :|||...:.||.|:.|..:|
 Frog   496 LSPDQRRIFSAAANGTANIW 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzyNP_477501.1 WD40 <208..500 CDD:225201 129/291 (44%)
WD40 216..498 CDD:238121 122/283 (43%)
WD40 repeat 256..291 CDD:293791 20/34 (59%)
WD40 repeat 297..332 CDD:293791 20/34 (59%)
WD40 repeat 337..373 CDD:293791 12/35 (34%)
WD40 repeat 386..424 CDD:293791 17/37 (46%)
WD40 repeat 429..467 CDD:293791 18/37 (49%)
WD40 repeat 473..513 CDD:293791 11/25 (44%)
cdc20bXP_004910413.1 WD40 <220..516 CDD:225201 129/299 (43%)
WD40 repeat 234..270 CDD:293791 11/35 (31%)
WD40 repeat 275..312 CDD:293791 20/36 (56%)
WD40 repeat 318..349 CDD:293791 18/30 (60%)
WD40 repeat 357..396 CDD:293791 12/38 (32%)
WD40 repeat 404..440 CDD:293791 16/35 (46%)
WD40 repeat 447..485 CDD:293791 18/37 (49%)
WD40 repeat 491..517 CDD:293791 11/25 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1220675at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19918
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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