DRSC/TRiP Functional Genomics Resources

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Protein Alignment cni and AT1G62880

DIOPT Version :9

Sequence 1:NP_001260495.1 Gene:cni / 34967 FlyBaseID:FBgn0000339 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_176476.1 Gene:AT1G62880 / 842589 AraportID:AT1G62880 Length:137 Species:Arabidopsis thaliana


Alignment Length:135 Identity:36/135 - (26%)
Similarity:70/135 - (51%) Gaps:7/135 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FTYIVALIGDAFLIFFAIFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHIFLNLLFLFCGEW 72
            :|:|::.:....|:...::.:|:..:|:.||.||.|..:.:|.:||||.:|..||.:.:|..|.|
plant     5 WTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHW 69

  Fly    73 FSLCINIPLIAYHIWRYKNRPVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGM 137
            |...:.:|.:.|:...|..:     ..|.|.|.:.  :.|....::...|||..:::.|..|:.:
plant    70 FMALLCVPYLYYNFHLYSRK-----QHLIDVTEIF--NLLDWEKKKRLFKLAYIILTLFLTIFWL 127

  Fly   138 VYSLI 142
            :||.:
plant   128 IYSTL 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cniNP_001260495.1 Cornichon 7..135 CDD:281325 33/126 (26%)
AT1G62880NP_176476.1 Cornichon 4..125 CDD:397410 33/126 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2729
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1602458at2759
OrthoFinder 1 1.000 - - FOG0000471
OrthoInspector 1 1.000 - - otm2862
orthoMCL 1 0.900 - - OOG6_101313
Panther 1 1.100 - - O PTHR12290
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X297
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.780

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