DRSC/TRiP Functional Genomics Resources

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Protein Alignment cni and AT1G12340

DIOPT Version :10

Sequence 1:NP_477068.1 Gene:cni / 34967 FlyBaseID:FBgn0000339 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_563903.2 Gene:AT1G12340 / 837788 AraportID:AT1G12340 Length:129 Species:Arabidopsis thaliana


Alignment Length:118 Identity:35/118 - (29%)
Similarity:61/118 - (51%) Gaps:7/118 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHIFLNLLFLFCGEWFSLCINIPLIAYHIWRY 89
            |||::...:|:.||.||.|..:.:|.:||||:::...|.:.:|..|.||...:.:|.:.|:...|
plant    14 IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLY 78

  Fly    90 KNRPVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGMVYSLI 142
            ..|     ..|.|.|.:.  :.|....::...|||..:::.|..|:.|:||.:
plant    79 SKR-----QHLVDVTEIF--NLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSAL 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cniNP_477068.1 Cornichon 7..135 CDD:460883 31/109 (28%)
AT1G12340NP_563903.2 Cornichon 14..117 CDD:460883 31/109 (28%)

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