DRSC/TRiP Functional Genomics Resources

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Protein Alignment cni and AT4G12090

DIOPT Version :9

Sequence 1:NP_001260495.1 Gene:cni / 34967 FlyBaseID:FBgn0000339 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_192946.2 Gene:AT4G12090 / 826817 AraportID:AT4G12090 Length:135 Species:Arabidopsis thaliana


Alignment Length:133 Identity:36/133 - (27%)
Similarity:64/133 - (48%) Gaps:7/133 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YIVALIGDAFLIFFAIFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHIFLNLLFLFCGEWFS 74
            :|::.:..|.||...|:.:....:|:.|..||.|..:.:|.:||||:.|...|.|.::..|.||.
plant     7 WIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFM 71

  Fly    75 LCINIPLIAYHIWRYKNRPVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGMVY 139
            ..:::|.:.|:|..|..|     ..|.|.|.:..|:...:..|.  .|:....:|.|...|.:::
plant    72 AVLSLPHLFYNIRLYMKR-----EHLADVTELYNTNKWEQKKRV--YKIGHIALSIFITTYWLIH 129

  Fly   140 SLI 142
            |.:
plant   130 SAL 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cniNP_001260495.1 Cornichon 7..135 CDD:281325 34/124 (27%)
AT4G12090NP_192946.2 Cornichon 7..125 CDD:367442 34/124 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2729
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1602458at2759
OrthoFinder 1 1.000 - - FOG0000471
OrthoInspector 1 1.000 - - otm2862
orthoMCL 1 0.900 - - OOG6_101313
Panther 1 1.100 - - O PTHR12290
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X297
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.780

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