DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx5 and SED5

DIOPT Version :9

Sequence 1:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_013126.1 Gene:SED5 / 850713 SGDID:S000004016 Length:340 Species:Saccharomyces cerevisiae


Alignment Length:343 Identity:115/343 - (33%)
Similarity:178/343 - (51%) Gaps:41/343 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 MAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSY-----------SEFMMVARFIGKNI 211
            |..:|||.||..::.|.:.||.......|:..:.|:.:::           |||...|..|...|
Yeast     1 MNIKDRTSEFQQSVLSYKKRNKNFREQQRERLQEKESENFANNTTGNGKSVSEFQKKASGIAHEI 65

  Fly   212 ASTYAKLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISK-DQRRHTNGK-- 273
            :||...|.||.:|||:|.:|:|.|.||.||:::||..:.|:.|.:.:|..:.| |...:|:.:  
Yeast    66 SSTAQLLSKLAVLAKRKPMFNDNPVEIAELSFLIKRKIYAIEQSLVQLSQLKKTDVNGNTSNQSS 130

  Fly   274 ---HLVSHSSNMVLALQSKLASMSTDFKQILEVRTENLKQQKTRRDQFSQGPGPLAAH------- 328
               ..|.||.|:|..|.:::.::|..||.:||.|.......|.|..:.:...|...|.       
Yeast   131 KQPSAVQHSKNVVNLLNTQMKNISGSFKDVLEERQRLEMANKDRWQKLTTDTGHAPADDQTQSNH 195

  Fly   329 -----TVSPSTAKQGSLL--LSEENQAVS----IDMGSSDTTPLLSTQTQMAIYDDSDN-YVQQR 381
                 |.:.|.....|||  .||:|...|    :....:|:..:|..:.|:     |:| |:|:|
Yeast   196 AADLTTYNNSNPFMTSLLDESSEKNNNSSNQGELSFPQNDSQLMLMEEGQL-----SNNVYLQER 255

  Fly   382 AETMQNIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRW 446
            ...::.|||||.|:|.:|||||.||:||.|:::|||.||.|.:|||..|..|:||||..:..|||
Yeast   256 NRAVETIESTIQEVGNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRELLKYFDRIKSNRW 320

  Fly   447 LMIKIFGVLIFFFLFFVV 464
            |..|:|.::..||:.:|:
Yeast   321 LAAKVFFIIFVFFVIWVL 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx5NP_523582.4 SNARE_syntaxin5 379..451 CDD:277197 38/71 (54%)
SED5NP_013126.1 SNARE_syntaxin5 252..324 CDD:277197 38/71 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344621
Domainoid 1 1.000 101 1.000 Domainoid score I1554
eggNOG 1 0.900 - - E1_KOG0812
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2381
Inparanoid 1 1.050 166 1.000 Inparanoid score I1033
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53826
OrthoFinder 1 1.000 - - FOG0003050
OrthoInspector 1 1.000 - - oto99171
orthoMCL 1 0.900 - - OOG6_102103
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1315
SonicParanoid 1 1.000 - - X2031
TreeFam 1 0.960 - -
1514.790

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