DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx5 and SYP32

DIOPT Version :10

Sequence 1:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001189961.1 Gene:SYP32 / 822024 AraportID:AT3G24350 Length:361 Species:Arabidopsis thaliana


Alignment Length:353 Identity:123/353 - (34%)
Similarity:177/353 - (50%) Gaps:48/353 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 RDRTGEFANAIRSLQ--------ARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYAK 217
            |||:.||...:.:|:        |.|:....|..|..:.:.:.:.|||...|..||..|..|..|
plant    11 RDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNKRASHIGLAINQTSQK 75

  Fly   218 LEKLT--------------MLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQ---DISKD 265
            |.||.              .:||:.|:|||..|||||||.:||.:::|||..:..||   ....|
plant    76 LSKLAKRIRMVLRSRTDLFSVAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQND 140

  Fly   266 QRRHTNGKHLVSHSSNMVLALQSKLASMSTDFKQILEVRTENLKQQKTRRDQFSQGPG------- 323
            :..::..:...:||:.:|..|:.:|...:.:||.:|.:||||:|..::||..||....       
plant   141 EGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKESTNPF 205

  Fly   324 ----PLAAHTVS----PSTAKQGSLLLSEENQAVSIDMGSSDTTPLL------STQTQMAIYDDS 374
                ||||...:    |.....||  .|..:|.|....|..:::|||      ..|.|..:....
plant   206 VRQRPLAAKAAASESVPLPWANGS--SSSSSQLVPWKPGEGESSPLLQQSQQQQQQQQQQMVPLQ 268

  Fly   375 DNYVQQRAETMQNIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQ 439
            |.|:|.|||.:..:||||.||..||.|||.||.:|.||..|||.|:.|...|:|.|..::.:|..
plant   269 DTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLN 333

  Fly   440 SVSKNRWLMIKIFGVLIFFFLFFVVFMS 467
            |:|.|||||:|||.|||.|.:.|:.|::
plant   334 SISSNRWLMMKIFFVLIAFLMIFLFFVA 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx5NP_523582.4 COG5325 207..449 CDD:227635 99/279 (35%)
SNARE_syntaxin5 379..451 CDD:277197 36/71 (51%)
SYP32NP_001189961.1 SNARE_syntaxin5 272..356 CDD:277197 43/83 (52%)

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